DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dmtn and tmcc3

DIOPT Version :9

Sequence 1:NP_001163531.1 Gene:Dmtn / 40792 FlyBaseID:FBgn0037443 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001072261.1 Gene:tmcc3 / 779714 XenbaseID:XB-GENE-977501 Length:473 Species:Xenopus tropicalis


Alignment Length:426 Identity:170/426 - (39%)
Similarity:248/426 - (58%) Gaps:50/426 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 DRLNTKIQCTKESIRQEQTARDDNVNEYLKLAASADKQQLQRIKAVFEKKNQKSAHNISQLQKKL 318
            |.|..||....|.|:.||||||.||.|||||..||||||..|||.|||||||||||:|:||||||
 Frog    69 DSLKQKILKVTEQIKIEQTARDGNVAEYLKLVNSADKQQAGRIKQVFEKKNQKSAHSIAQLQKKL 133

  Fly   319 DNYTKRAKDLQNHQFQTKSQHRQPREV---LRDVGQGLR--NVGGNIRDGITGFSGS----VMSK 374
            :.|.|:.|:::.:...:||.....:::   |:||..|.|  ..|...:.|:.|.|.:    |.:|
 Frog   134 EQYHKKLKEIEQNGSASKSSKDISKDLQHSLKDVTNGSRPAGQGETSKMGVPGVSLTPPMFVFNK 198

  Fly   375 PREFAHLIKNKFGSADNINQMSEAELQGMQSANADVLGSERLQQVPGAGTSTGSGGGGQNNNTGG 439
            .||||:||:|||||||||..:.                            :|......:.|:...
 Frog   199 SREFANLIRNKFGSADNIAHLK----------------------------NTLDDFHPETNSRNL 235

  Fly   440 AGSGT----GKFNSDNGSECSSVTSESIPGGSGKS----QSGASQYHIVLKTLLTELAERKAENE 496
            :||.|    .|:.||:  ||||.||.|......::    ::.||..|..|...|.||.|.|....
 Frog   236 SGSATIVTKPKYASDD--ECSSGTSASADSNGNQTFDTGRTNASDSHGNLSVFLEELREIKDAQS 298

  Fly   497 KLKERIERLETG-QKEFNNLTATLESERYRAEGLEEQINDLTELHQNEIENLKQTIADMEEKVQY 560
            :|.|.||.|:.. :::::.::.||:.||||.|.||:|:||||:|||:|..||||.:|.:||||.|
 Frog   299 QLAEDIETLKVHFKRDYSLISQTLQEERYRYERLEDQLNDLTDLHQHETTNLKQDLASIEEKVAY 363

  Fly   561 QSDERLRDVNEVLENCQTRISKMEHMSQQQYVTVEGIDNSNARALVVKLINVVLTILQVVLLLVA 625
            |:.||.||:.|.||:||||:||:| :.||:.:.::. :..||:.|:.|.||::|.::.|:|:.|:
 Frog   364 QAYERSRDIQEALESCQTRVSKLE-LHQQEQLAIQS-ETVNAKVLLGKCINILLALITVILVCVS 426

  Fly   626 TAAGIIMPFLKTRVRVLTTFLSICFVIFVIRQWPDV 661
            |.|..:.|.:|:|:.::.||.::..:..|.:.|..:
 Frog   427 TIAKFVAPMMKSRLHIIFTFFAVTLLAVVCKNWDHI 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DmtnNP_001163531.1 Tmemb_cc2 253..658 CDD:287269 169/421 (40%)
tmcc3NP_001072261.1 Tmemb_cc2 65..459 CDD:370936 169/421 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 319 1.000 Domainoid score I1244
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 319 1.000 Inparanoid score I2485
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1175041at2759
OrthoFinder 1 1.000 - - FOG0001642
OrthoInspector 1 1.000 - - otm47421
Panther 1 1.100 - - O PTHR17613
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3682
SonicParanoid 1 1.000 - - X1199
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

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