DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dmtn and Tmcc2

DIOPT Version :9

Sequence 1:NP_001163531.1 Gene:Dmtn / 40792 FlyBaseID:FBgn0037443 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_849205.1 Gene:Tmcc2 / 68875 MGIID:1916125 Length:706 Species:Mus musculus


Alignment Length:750 Identity:254/750 - (33%)
Similarity:355/750 - (47%) Gaps:175/750 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TEQMSRERASEAAAATQTAAATAGGATAHSAGGTAGGSAAATTTAGGATSGSGTASANTNSNSSA 109
            ::::.:::..|..|..:.||....||....      |.|::..:|||.||.:|.|.|......|.
Mouse     6 SDELQQQQGEEDGAGMEDAACLLPGADLRH------GEASSANSAGGPTSDAGAAVAPNPGPRSK 64

  Fly   110 SSSTVAAAQAAVYSGGNTVTGSLGSAGVVARGFRSHSPTHRRRSRER----------QRRTHG-S 163
            ........|.:        .||:...|:      .|....|||||||          |::..| |
Mouse    65 PPDLKKIQQLS--------EGSMFGHGL------KHLFHSRRRSREREHQASQEAQQQQQQQGLS 115

  Fly   164 DQGG---------LLAYSGLVGVNDM----TDFLGPQQ-----GGGGGGGGGGGGGGGGGSAGTG 210
            ||..         :...|..|.::|:    |.|....|     .....|......||.||.....
Mouse   116 DQDSPDEKERSPEMHRVSYAVSLHDLPARPTAFNRVLQQIRSRPSIKRGASLHSSGGSGGRRAKS 180

  Fly   211 SGLE--------------DSRLS------------------------GNEDYY----SSFVSDEF 233
            |.||              ||.|:                        |:..|.    :..:.|:.
Mouse   181 SSLEPQRGSPHLLRKAPQDSSLAAILHQHQGRPRSSSTTDTALLLADGSSAYLLAEEAESIGDKG 245

  Fly   234 DS---------------------SKKVHRRCHERSSSVQAIDRLNTKIQCTKESIRQEQTARDDN 277
            |.                     |..|.....:...:..||:.|:.||....|.|:.||.|||||
Mouse   246 DKGDLVALSLPSGPGHGDSDGPISLDVPDGAPDPQRTKAAIEHLHQKILKITEQIKIEQEARDDN 310

  Fly   278 VNEYLKLAASADKQQLQRIKAVFEKKNQKSAHNISQLQKKLDNYTKRAKDLQNHQFQTKSQHRQP 342
            |.||||||.:|||||:.|||.||||||||||..|:||.|||::|.:|.|:::.:     ...|||
Mouse   311 VAEYLKLANNADKQQVSRIKQVFEKKNQKSAQTIAQLHKKLEHYRRRLKEIEQN-----GPSRQP 370

  Fly   343 REVLRDVGQGLRNVGGNIRDGITGFSG-------------------SVMSKPREFAHLIKNKFGS 388
            ::||||:.|||::||.|:|.||:||.|                   :|:|||||||.||:|||||
Mouse   371 KDVLRDMQQGLKDVGANMRAGISGFGGGVVEGVKGSLSGLSQATHTAVVSKPREFASLIRNKFGS 435

  Fly   389 ADNINQMSEAELQGMQSANADVL-GSERLQQVPGAGT-------STGSGGGGQNNNTGGAGS-GT 444
            ||||..:.:....|.....|..| ||..|...|..|:       |..|.|.|.|:..|..|: |:
Mouse   436 ADNIAHLKDPMEDGPPEEAARALSGSATLVSSPKYGSDDECSSASASSAGAGSNSGAGPGGALGS 500

  Fly   445 GKFNSDNGSECSSVTSESIPGGSGKSQSGASQYHIVLKTLLTELAERKAENEKLKERIERLETG- 508
            .:.|:..|:          ||.              |.|||.||.|.|.....|::.:|.|:|. 
Mouse   501 PRSNTLYGA----------PGN--------------LDTLLEELREIKEGQSHLEDSMEDLKTQL 541

  Fly   509 QKEFNNLTATLESERYRAEGLEEQINDLTELHQNEIENLKQTIADMEEKVQYQSDERLRDVNEVL 573
            |:::..:|..|:.||||.|.||||:||||||||||:.||||.:|.|||||.|||.||.||:.|.:
Mouse   542 QRDYTYMTQCLQEERYRYERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAV 606

  Fly   574 ENCQTRISKME-HMSQQQYVTVEGIDNSNARALVVKLINVVLTILQVVLLLVATAAGIIMPFLKT 637
            |:|.||::|:| ...|||.|.:||::|:|||||:.|.|||:|.::.|:|:.|:|.|..|.|.:||
Mouse   607 ESCLTRVTKLELQQQQQQVVQLEGVENANARALLGKFINVILALMAVLLVFVSTIANFITPLMKT 671

  Fly   638 RVRVLTTFLSICFVIFVIRQWPDVQDIGSGLVRHL 672
            |:|:.:|.|.:..:..:.:.|..:    :.|:.|:
Mouse   672 RLRITSTALLLLVLFLLWKHWASL----TYLLEHV 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DmtnNP_001163531.1 Tmemb_cc2 253..658 CDD:287269 193/434 (44%)
Tmcc2NP_849205.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..221 51/234 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 251..280 2/28 (7%)
Tmemb_cc2 286..692 CDD:287269 193/434 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 440..459 2/18 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 464..510 13/55 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830706
Domainoid 1 1.000 324 1.000 Domainoid score I1191
eggNOG 1 0.900 - - E1_KOG3850
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 324 1.000 Inparanoid score I2474
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001642
OrthoInspector 1 1.000 - - otm42317
orthoMCL 1 0.900 - - OOG6_105734
Panther 1 1.100 - - LDO PTHR17613
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3682
SonicParanoid 1 1.000 - - X1199
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.780

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