DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dmtn and tmcc3

DIOPT Version :10

Sequence 1:NP_001163531.1 Gene:Dmtn / 40792 FlyBaseID:FBgn0037443 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001038278.1 Gene:tmcc3 / 556763 ZFINID:ZDB-GENE-030131-1811 Length:476 Species:Danio rerio


Alignment Length:442 Identity:179/442 - (40%)
Similarity:247/442 - (55%) Gaps:71/442 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 IDRLNTKIQCTKESIRQEQTARDDNVNEYLKLAASADKQQLQRIKAVFEKKNQKSAHNISQLQKK 317
            :|.|..||...||.:|.||..:|:||.|||||...|||||..|||.||||||||:||||||||||
Zfish    64 LDSLQQKILKVKEQLRIEQNLQDENVAEYLKLINCADKQQSGRIKQVFEKKNQKTAHNISQLQKK 128

  Fly   318 LDNYTKRAK--DLQNHQFQTKSQHRQPREVLRD-------VGQG-------LRNVGGNIRDGITG 366
            |:.|.::.|  |:.|     .::|..|::...|       .|.|       ::.:|    .|::.
Zfish   129 LEQYQRKMKESDISN-----GTKHATPKDKDNDNLKETVVTGSGRHPHLDKVKTIG----PGVSL 184

  Fly   367 FSGSVMSKPREFAHLIKNKFGSADNINQM-SEAEL-QGMQS-ANADVL-GSERLQQVPGAGTSTG 427
            ......|||||.|:||:|||||||||..: |..|. .|:|: |.|.:| ||..|...|       
Zfish   185 SPPFFFSKPREIANLIRNKFGSADNIAHLKSSMETGSGLQAEAGARILSGSATLTPKP------- 242

  Fly   428 SGGGGQNNNTGGAGSGTGKFNSDNGSECSSVTSESIPG-----GSGKS--QSGASQYHIVLKTLL 485
                              |:.||:  |||:.||.|:..     |||.:  .||:::...|...||
Zfish   243 ------------------KYPSDD--ECSTETSVSVESNGQVTGSGTTGQHSGSAREAEVNSRLL 287

  Fly   486 ---TELAERKAENEKLKERIERLETGQK-EFNNLTATLESERYRAEGLEEQINDLTELHQNEIEN 546
               .|:.|.:.....|.:.||.|:...| |..|:|.||:.||||.|.||:|:||||||||||..|
Zfish   288 EACEEIRELREAQSLLADDIETLKNQFKCEVENITQTLQEERYRCEHLEDQLNDLTELHQNETAN 352

  Fly   547 LKQTIADMEEKVQYQSDERLRDVNEVLENCQTRISKME-HMSQQQYVTVEGIDNSNARALVVKLI 610
            |||.:|.:|||:.||:.||.||:.:.||.||||:||:| ...|||.:.:||.|   |:.|:.|.|
Zfish   353 LKQELASIEEKMAYQAYERARDIQDALEVCQTRVSKLELQQQQQQVLQLEGTD---AKVLLGKCI 414

  Fly   611 NVVLTILQVVLLLVATAAGIIMPFLKTRVRVLTTFLSICFVIFVIRQWPDVQ 662
            |::|.|:.|:|:.|:|||....|.:::|:.|..|.:.:|.:::....|..:|
Zfish   415 NIMLAIVTVILVCVSTAAKFSAPLMRSRLHVFGTLVCVCLLLYSWSNWEHLQ 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DmtnNP_001163531.1 Tmemb_cc2 249..658 CDD:463036 177/436 (41%)
tmcc3NP_001038278.1 Tmemb_cc2 60..462 CDD:463036 177/436 (41%)

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