DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dmtn and Tmcc1

DIOPT Version :9

Sequence 1:NP_001163531.1 Gene:Dmtn / 40792 FlyBaseID:FBgn0037443 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_036022146.1 Gene:Tmcc1 / 330401 MGIID:2442368 Length:693 Species:Mus musculus


Alignment Length:716 Identity:237/716 - (33%)
Similarity:335/716 - (46%) Gaps:190/716 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDTTPNAAPNPNQNRDFVTLK-PLRPSRGSSSNLRASRSPSASRSTEQMSRERASEAAAATQTAA 64
            :.|.|.|.     ||....:: |.:..||:|.:.|..:| .|.:.:.|::|:...|.||..|   
Mouse    95 VSTHPTAL-----NRVLQQIRVPPKMKRGTSLHSRRGKS-EAPKGSPQINRKSGQEVAAVIQ--- 150

  Fly    65 ATAGGATAHSAGGTAGGSAAATTTAGGATSGSGTASANTNSNSSASSSTVAAAQAAVYSGGNTVT 129
                                         ||...:|:.|::.:|:|...:|.|            
Mouse   151 -----------------------------SGRPRSSSTTDAPTSSSVMEIACA------------ 174

  Fly   130 GSLGSAGVVARGFRSHSPTHRRRSRERQRRTHGSDQGGLLAYSGLVGVNDMTDFLGP-------- 186
                 |||...|        ...:.||                       :.||.||        
Mouse   175 -----AGVCVPG--------EEATAER-----------------------LEDFTGPLMAEVQAE 203

  Fly   187 ----QQGGGGGGGGGGGGGGGGGSAGTGSGLEDSRLSGNEDY---------------YSSFVSDE 232
                :|                 .:|....||:...:.:.||               .||.|:..
Mouse   204 SQKSKQ-----------------VSGKQCILEEGASARSLDYKSWKIERLEVSSLAQTSSAVASS 251

  Fly   233 FDSSKKVHRRCHERSSSVQ----AIDRLNTKIQCTKESIRQEQTARDDNVNEYLKLAASADKQQL 293
            .|.|  :|....:.....|    ||..|..||....|.|:..||||||||.||||||.||||||.
Mouse   252 TDGS--IHTESVDGIPDPQRTKAAIAHLQQKILKLTEQIKIAQTARDDNVAEYLKLANSADKQQA 314

  Fly   294 QRIKAVFEKKNQKSAHNISQLQKKLDNYTKRAKDLQNHQFQTKSQHRQPREVLRDVGQGLRNVGG 358
            .|||.||||||||||..|.||||||::|.::.::::.:...     |||::|.||:.|||::||.
Mouse   315 ARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREVEQNGIP-----RQPKDVFRDMHQGLKDVGA 374

  Fly   359 -----------NIRDGITGFS-------GSVMSKPREFAHLIKNKFGSADNINQMSEAELQGMQS 405
                       :::.|.:.||       |:|:|||||.|.||:|||||||||..:.::..:|...
Mouse   375 KVTGFSEGVVDSVKGGFSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIPNLKDSLEEGQVD 439

  Fly   406 ANADVLG-SERLQQVPGAG-----TSTGSGGGGQNNNTGGAGSGTGKFNSDNGSECSSVTSESIP 464
            .....|| ....|..|..|     :|..||..|.|:.|||...|.      :.|:.:::..:|  
Mouse   440 DGGKALGVISNFQSSPKYGSEEDCSSATSGSVGANSTTGGIAVGA------SSSKTNTLDMQS-- 496

  Fly   465 GGSGKSQSGASQYHIVLKTLLTELAERKAENEKLKERIERL-ETGQKEFNNLTATLESERYRAEG 528
                   ||       ...||.|:.|.:....:|::..|.| |..|::::.:..||:.||||.|.
Mouse   497 -------SG-------FDALLHEVQEIRETQARLEDSFETLKEHYQRDYSLIMQTLQEERYRCER 547

  Fly   529 LEEQINDLTELHQNEIENLKQTIADMEEKVQYQSDERLRDVNEVLENCQTRISKME-HMSQQQYV 592
            ||||:|||||||||||.||||.:|.||||:.|||.||.||:.|.||.||||||||| ...|||.|
Mouse   548 LEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVV 612

  Fly   593 TVEGIDNSNARALVVKLINVVLTILQVVLLLVATAAGIIMPFLKTRVRVLTTFLSICFVIFVIRQ 657
            .:||::|:.||.|:.||||::|.::.|:|:.|:|.|..::|.:|||.|..:|...:.|:.|:.:.
Mouse   613 QLEGLENATARNLLGKLINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLFLVAFIAFLWKH 677

  Fly   658 W 658
            |
Mouse   678 W 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DmtnNP_001163531.1 Tmemb_cc2 253..658 CDD:287269 186/430 (43%)
Tmcc1XP_036022146.1 Tmemb_cc2 271..678 CDD:402057 187/433 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830708
Domainoid 1 1.000 324 1.000 Domainoid score I1191
eggNOG 1 0.900 - - E1_KOG3850
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 324 1.000 Inparanoid score I2474
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1175041at2759
OrthoFinder 1 1.000 - - FOG0001642
OrthoInspector 1 1.000 - - otm42317
orthoMCL 1 0.900 - - OOG6_105734
Panther 1 1.100 - - O PTHR17613
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3682
SonicParanoid 1 1.000 - - X1199
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

Return to query results.
Submit another query.