DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dmtn and Tmcc2

DIOPT Version :9

Sequence 1:NP_001163531.1 Gene:Dmtn / 40792 FlyBaseID:FBgn0037443 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001292057.1 Gene:Tmcc2 / 305095 RGDID:1311960 Length:706 Species:Rattus norvegicus


Alignment Length:753 Identity:257/753 - (34%)
Similarity:356/753 - (47%) Gaps:181/753 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TEQMSRERASEAAAATQTAAATAGGATAHSAGGTAGGSAAATTTAGGATSGSGTASANTNSNSSA 109
            ::::.:::..|..|..:.||....||....      |.|::..:|||.||.:|.|.|......|.
  Rat     6 SDELQQQQGEEDGAGMEDAACLLPGADLRH------GEASSANSAGGPTSDAGAAVAPNPGPRSK 64

  Fly   110 SSSTVAAAQAAVYSGGNTVTGSLGSAGVVARGFRSHSPTHRRRSRER---------QRRTHG--S 163
            ........|.:        .||:...|:      .|....|||||||         |::.|.  |
  Rat    65 PPDLKKIQQLS--------EGSMFGHGL------KHLFHSRRRSREREHQASQEAQQQQQHQGLS 115

  Fly   164 DQGG---------LLAYSGLVGVNDM----TDFLGPQQ-----GGGGGGGGGGGGGGGGGSAGTG 210
            ||..         :...|..|.::|:    |.|....|     .....|......||.||.....
  Rat   116 DQDSPDEKERSPEMHRVSYAVSLHDLPARPTAFNRVLQQIRSRPSIKRGASLHSSGGSGGRRAKS 180

  Fly   211 SGLE--------------DSRLS------------------------GNEDYYSSFVSDEFDS-- 235
            |.||              ||.|:                        |:..|   .:::|.:|  
  Rat   181 SSLEPQRGSPHLLRKAPQDSSLTAILHQHQGRPRSSSTTDTALLLADGSNAY---LLAEEAESTG 242

  Fly   236 --------------------------SKKVHRRCHERSSSVQAIDRLNTKIQCTKESIRQEQTAR 274
                                      |..|.....:...:..|||.|:.||....|.|:.||.||
  Rat   243 DKGDKGDLVALSLPSGPGHGDTDGPISLDVPDGAPDPQRTKAAIDHLHQKILKITEQIKIEQEAR 307

  Fly   275 DDNVNEYLKLAASADKQQLQRIKAVFEKKNQKSAHNISQLQKKLDNYTKRAKDLQNHQFQTKSQH 339
            ||||.||||||.:|||||:.|||.||||||||||..|:||.|||:.|.:|.|:::.:     ...
  Rat   308 DDNVAEYLKLANNADKQQVSRIKQVFEKKNQKSAQTIAQLHKKLEQYRRRLKEIEQN-----GPS 367

  Fly   340 RQPREVLRDVGQGLRNVGGNIRDGITGFSG-------------------SVMSKPREFAHLIKNK 385
            |||::||||:.|||::||.|:|.||:||.|                   :|:|||||||.||:||
  Rat   368 RQPKDVLRDMQQGLKDVGANMRAGISGFGGGVVEGVKGSLSGLSQATHTAVVSKPREFASLIRNK 432

  Fly   386 FGSADNINQMSEAELQGMQSANADVL-GSERLQQVPGAGT-------STGSGGGGQNNNTGGAGS 442
            |||||||..:.:....|.....|..| ||..|...|..|:       |..|.|.|.|:..|.||:
  Rat   433 FGSADNIAHLKDPMEDGPPEEAARALSGSATLVSSPKYGSDDECSSASASSAGAGSNSGAGPAGA 497

  Fly   443 -GTGKFNSDNGSECSSVTSESIPGGSGKSQSGASQYHIVLKTLLTELAERKAENEKLKERIERLE 506
             |:.:.|:..|:          ||.              |.|||.||.|.|.....|::.:|.|:
  Rat   498 LGSPRSNTLYGA----------PGN--------------LDTLLEELREIKDGQSHLEDSMEDLK 538

  Fly   507 TG-QKEFNNLTATLESERYRAEGLEEQINDLTELHQNEIENLKQTIADMEEKVQYQSDERLRDVN 570
            |. |:::..:|..|:.||||.|.||||:||||||||||:.||||.:|.|||||.|||.||.||:.
  Rat   539 TQLQRDYTYMTQCLQEERYRYERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQ 603

  Fly   571 EVLENCQTRISKME-HMSQQQYVTVEGIDNSNARALVVKLINVVLTILQVVLLLVATAAGIIMPF 634
            |.:|:|.||::|:| ...|||.|.:||::|:|||||:.|.|||:|.::.|:|:.|:|.|..|.|.
  Rat   604 EAVESCLTRVTKLELQQQQQQVVQLEGVENANARALLGKFINVILALMAVLLVFVSTIANFITPL 668

  Fly   635 LKTRVRVLTTFLSICFVIFVIRQWPDVQDIGSGLVRHL 672
            :|||:|:.:|.|.:..:..:.:.|    |..:.|:.|:
  Rat   669 MKTRLRITSTALLLLVLFLLWKHW----DSLTYLLEHV 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DmtnNP_001163531.1 Tmemb_cc2 253..658 CDD:287269 195/434 (45%)
Tmcc2NP_001292057.1 Tmemb_cc2 283..692 CDD:402057 196/437 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334419
Domainoid 1 1.000 324 1.000 Domainoid score I1165
eggNOG 1 0.900 - - E1_KOG3850
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 324 1.000 Inparanoid score I2406
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1175041at2759
OrthoFinder 1 1.000 - - FOG0001642
OrthoInspector 1 1.000 - - otm44373
orthoMCL 1 0.900 - - OOG6_105734
Panther 1 1.100 - - LDO PTHR17613
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1199
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.760

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