DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dmtn and tmcc1a

DIOPT Version :9

Sequence 1:NP_001163531.1 Gene:Dmtn / 40792 FlyBaseID:FBgn0037443 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_009302642.1 Gene:tmcc1a / 100330322 ZFINID:ZDB-GENE-111129-4 Length:479 Species:Danio rerio


Alignment Length:456 Identity:191/456 - (41%)
Similarity:264/456 - (57%) Gaps:71/456 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 CHERSSSVQAIDRLNTKIQCTKESIRQEQTARDDNVNEYLKLAASA-DKQQLQRIKAVFEKKNQK 306
            |.:...:.||:.:|..||....|.:|.||.||||||.||||||::| ||||..|||.||||||||
Zfish    71 CVDPQRTRQALAQLQQKILKLTEQLRIEQAARDDNVAEYLKLASNANDKQQSARIKQVFEKKNQK 135

  Fly   307 SAHNISQLQKKLDNYTKRAKDLQNHQFQTKSQHRQPREVLRDVGQGLRNVGGNIRDGITGFSGSV 371
            ||.:|:|||:||::..:|.:|:::...|     |||::||||:.|.||.|       :||.||.|
Zfish   136 SAASIAQLQRKLEHCHRRLRDVEHSGVQ-----RQPKDVLRDMQQNLRGV-------MTGLSGGV 188

  Fly   372 M-------SKPREFAHLIKNKFGSADNINQMSEAELQGMQSANADVLGS--ERLQQVPGAGTSTG 427
            :       |||||.|.|.:::|||||||:.:.:........|....|||  .|||..|       
Zfish   189 VDSVRGVASKPREIASLFRHRFGSADNISALRDGAEDVEDGATGRSLGSATARLQHSP------- 246

  Fly   428 SGGGGQNNNTGGAGSGTGKFNSDNGSECSSVTSES--------IPGG--SGKSQSGASQYHIVLK 482
                              ||.|::  :|||.||.|        .|||  |.:...|.      |:
Zfish   247 ------------------KFGSED--DCSSATSGSAEAHCGPGAPGGPPSSRGTGGG------LE 285

  Fly   483 TLLTELAERKAENEKLKERIERLETG-QKEFNNLTATLESERYRAEGLEEQINDLTELHQNEIEN 546
            .||.|:.|.:....:|:|::|.|::. ::|...|..||:.:|:|.|.||||:|||||||||||.|
Zfish   286 VLLQEVQELQEVQAQLEEQLEELKSSCREECAVLMQTLQEDRFRCERLEEQVNDLTELHQNEILN 350

  Fly   547 LKQTIADMEEKVQYQSDERLRDVNEVLENCQTRISKME-HMSQQQYVTVEGIDNSNARALVVKLI 610
            |||.:|.||||:.|||:||.||:.|.||.||||:|||| ...|||.|.:||::|:.||.|:.||:
Zfish   351 LKQELASMEEKIAYQSNERARDLQEALEACQTRVSKMELQQQQQQVVQLEGLENATARTLLGKLM 415

  Fly   611 NVVLTILQVVLLLVATAAGIIMPFLKTRVRVLTTFLSICFVIFVIRQWPDVQDIGSGLVRHLKQS 675
            .|:|.::.|:|:||:..|..::|.:|||.|.:::.|.:..:..:.|.|    |..||......|.
Zfish   416 TVLLALMAVLLVLVSAVANCVLPLMKTRSRSVSSLLLVLLLAVLWRNW----DSFSGHTHRFLQP 476

  Fly   676 L 676
            |
Zfish   477 L 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DmtnNP_001163531.1 Tmemb_cc2 253..658 CDD:287269 182/426 (43%)
tmcc1aXP_009302642.1 Tmemb_cc2 81..463 CDD:287269 182/426 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573448
Domainoid 1 1.000 321 1.000 Domainoid score I1205
eggNOG 1 0.900 - - E1_KOG3850
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 321 1.000 Inparanoid score I2497
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1175041at2759
OrthoFinder 1 1.000 - - FOG0001642
OrthoInspector 1 1.000 - - otm24987
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR17613
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3682
SonicParanoid 1 1.000 - - X1199
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.890

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