DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment gzl and AT1G53010

DIOPT Version :9

Sequence 1:	NP_001097695.1	Gene:	gzl / 40791	FlyBaseID:	FBgn0037442	Length:	536	Species:	Drosophila melanogaster
Sequence 2:	NP_175709.1	Gene:	AT1G53010 / 841734	AraportID:	AT1G53010	Length:	178	Species:	Arabidopsis thaliana

Alignment Length:	166	Identity:	45/166 - (27%)
Similarity:	66/166 - (39%)	Gaps:	69/166 - (41%)

- Green bases have known domain annotations that are detailed below.

  Fly   176 ILPFSILIGMCF----------IIMVIYMIYKCI------------------REQRRLR---RH- 208
            :|..::.||:|.          :|:|||:|..||                  |.|:|.|   .|
plant    14 VLGLAVFIGLCILLVVLIATSALILVIYVIIDCILRPFLGTCLDLDLEIGVQRGQQRARIVTYHT 78

  Fly   209 ------RLP----------------KSMLKKLPVLRYTKNNANNKYD--------TCVICLEDFI 243
                  |||                :::|.||.|     ...|::.|        .|.|||..::
plant    79 IISTGLRLPDFEREGKKRGLKQSVIETLLPKLLV-----GQGNHEEDEEKSLESRECAICLSGYV 138

  Fly   244 EDDKLRVLP-CSHPYHTHCIDPWLTENRRVCPICKR 278
            .:::.||.| |.|.||..|||.|| :|...||.|::
plant   139 VNEECRVFPVCRHIYHALCIDAWL-KNHLTCPTCRK 173

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
gzl	NP_001097695.1	PA_C_RZF_like	14..171	CDD:239038
gzl	NP_001097695.1	zf-RING_2	233..277	CDD:290367	20/52 (38%)
AT1G53010	NP_175709.1	RING_Ubox	129..172	CDD:418438	19/43 (44%)
AT1G53010	NP_175709.1	RING-H2 finger (C3H2C3-type)	130..171	CDD:319361	19/41 (46%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910