DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gzl and AT5G45290

DIOPT Version :9

Sequence 1:NP_001097695.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001119377.1 Gene:AT5G45290 / 834565 AraportID:AT5G45290 Length:546 Species:Arabidopsis thaliana


Alignment Length:68 Identity:28/68 - (41%)
Similarity:42/68 - (61%) Gaps:2/68 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 PKSMLKKLPVLRYTKNNANNKYDTCVICLEDFIEDDKLRVLPCSHPYHTHCIDPWLTE-NRRVCP 274
            |..::..||:..|||:.:.:. ..|.|||.::.|.|.:|.|||.|.:|..|:|.||.| :.||||
plant   467 PNDVVDLLPIKLYTKSQSEDP-SQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHSRVCP 530

  Fly   275 ICK 277
            :|:
plant   531 LCR 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gzlNP_001097695.1 PA_C_RZF_like 14..171 CDD:239038
zf-RING_2 233..277 CDD:290367 21/44 (48%)
AT5G45290NP_001119377.1 zf-RING_2 489..533 CDD:290367 21/43 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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