DRSC/TRiP Functional Genomics Resources

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Protein Alignment gzl and AT5G41430

DIOPT Version :9

Sequence 1:NP_001097695.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_198958.1 Gene:AT5G41430 / 834144 AraportID:AT5G41430 Length:161 Species:Arabidopsis thaliana


Alignment Length:45 Identity:21/45 - (46%)
Similarity:29/45 - (64%) Gaps:4/45 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 CVICLEDFIED--DKLRVLPCSHPYHTHCIDPWLTENRRVCPICK 277
            |.||||: :||  :.:|:..|.|.:|..|||.||.:||. ||.|:
plant   117 CSICLEE-LEDGHEIIRIKKCRHVFHRSCIDSWLKQNRS-CPNCR 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gzlNP_001097695.1 PA_C_RZF_like 14..171 CDD:239038
zf-RING_2 233..277 CDD:290367 20/43 (47%)
AT5G41430NP_198958.1 zf-RING_2 117..159 CDD:290367 20/43 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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