DRSC/TRiP Functional Genomics Resources

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Protein Alignment gzl and znrf3

DIOPT Version :9

Sequence 1:NP_001097695.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001072864.1 Gene:znrf3 / 780325 XenbaseID:XB-GENE-5937936 Length:853 Species:Xenopus tropicalis


Alignment Length:551 Identity:105/551 - (19%)
Similarity:201/551 - (36%) Gaps:124/551 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 YRKATSQLIEEFNDLPAQFGPNLPSNGLKVYVVPARRPYYGCDSLDRPPHLKYPPSAKFVALVAR 95
            |:..|::|...|    ::.|..:.:.|..|.:    .|...|::.|.....:|    .:|.:|..
 Frog    47 YKTHTTELQGRF----SRAGATISAEGEIVQM----HPLGLCNNNDEEDLYEY----GWVGVVKL 99

  Fly    96 GE-------C--VFERKIRVAQNASYSAVIVYNNEGDDLEQMSAENITGIRIPSVFVGHTTGKAL 151
            .:       |  |..:..|..|..:.:.:...::..|.:||::......::.|.|::     |.:
 Frog   100 EQPEMDPKPCLTVLGKAKRAVQRGATAVIFDVSDNPDAVEQLNQGLEDPLKRPVVYM-----KGM 159

  Fly   152 ATYFTTEVVLIINDELPFNINTQ--------------LILPFSILIGMCFIIMVIYMIYKCIREQ 202
            .   ..:::.|:|.:.......|              :.|.|.:::.:..:|::|.:..|..|.|
 Frog   160 D---AIKLMNIVNKQKGARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLIKIKLKQRRSQ 221

  Fly   203 RRLRRHRLPKSMLKKLPVLRYTKNN--------------ANNKYDTCVICLEDFIEDDKLRVLPC 253
            ..:  :|:....|:|:...::....              :::....|.||||.:|:.::|||:||
 Frog   222 NSM--NRMAVQALEKMETRKFKAKGKVPREGSCGGLDTLSSSSTSDCAICLEKYIDGEELRVIPC 284

  Fly   254 SHPYHTHCIDPWLTENRRVCPICKRKVF--TKG-------EARASRSRQPSLDNVTDTDDDTTPL 309
            :|.:|..|:||||.:| ..||.|:..:.  .||       |..::|.||                
 Frog   285 THRFHKRCVDPWLLQN-HTCPHCRHNIIEQKKGGHGPVCVENSSNRGRQ---------------- 332

  Fly   310 LQQQQS-------NGR--QVGQVSSASSAGGAAGSSSSVAAAAVAG-------TTRHGTFRRGHA 358
             ||||.       .||  :.|.:::..:........:.:....|..       ..|..||.   |
 Frog   333 -QQQQRVILPVHYPGRVQRTGPIAAYPTRTSMGPHGNPITVLTVERPLEPDLYPARTPTFL---A 393

  Fly   359 GRNPFEESQSSDDENALLASTVRPATSSG-AHERINPFDRAPNLPAHLAEQLTESRRSVWSRINF 422
            |..|.....:|...:..|.....||..:| ...|.....|..|.....::..|..:...:..:::
 Frog   394 GYRPVSLDHASSGHHCDLEHPPYPAPPAGHGFRRAKYSGRGFNNGTCYSQYETMYQHYYFQGLSY 458

  Fly   423 ASFFRRQPAVISVAAPPYLER-----VESGTSAMGLPVTGTIAVASPASNNILNPNLSGSFKDED 482
            .    .|..|....||..:|.     ..||.:.:..|....:.:|.|:|       :...:....
 Frog   459 P----HQQEVGGSQAPRVVENGHNHSFHSGNNMLYQPAPTLMHMAPPSS-------VGSCYLHSQ 512

  Fly   483 DMPPHRSIYEPIAISTPAADSATVDDSAFLQ 513
            ..  |||:........|.:||::...::..|
 Frog   513 HQ--HRSVCSGYLADVPCSDSSSSSSASSAQ 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gzlNP_001097695.1 PA_C_RZF_like 14..171 CDD:239038 25/148 (17%)
zf-RING_2 233..277 CDD:290367 21/43 (49%)
znrf3NP_001072864.1 ZNRF_3_ecto 74..180 CDD:375639 18/121 (15%)
RING-H2_ZNRF3 266..309 CDD:319713 22/43 (51%)
RING-H2 finger (C3H2C3-type) 266..306 CDD:319713 21/40 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 583..629
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 650..673
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 685..713
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 834..853
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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