DRSC/TRiP Functional Genomics Resources

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Protein Alignment gzl and RNF6

DIOPT Version :9

Sequence 1:NP_001097695.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_005968.1 Gene:RNF6 / 6049 HGNCID:10069 Length:685 Species:Homo sapiens


Alignment Length:114 Identity:35/114 - (30%)
Similarity:55/114 - (48%) Gaps:35/114 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 EQRRLRRHRLPKSMLK--KLPVLRY---------------------------TKNNANNKYDT-- 234
            :.|..|:.|.|.::::  .||:||.                           |::..:|..|:  
Human   564 DSRGGRQLRNPNNLVETGTLPILRLAHFFLLNESDDDDRIRGLTKEQIDNLSTRHYEHNSIDSEL 628

  Fly   235 ---CVICLEDFIEDDKLRVLPCSHPYHTHCIDPWLTENRRVCPICKRKV 280
               |.:|:.|::..:|||.|||.|.:|.||||.||:|| ..||||::.|
Human   629 GKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSEN-CTCPICRQPV 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gzlNP_001097695.1 PA_C_RZF_like 14..171 CDD:239038
zf-RING_2 233..277 CDD:290367 23/48 (48%)
RNF6NP_005968.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..107
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..142
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..273
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..345
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 499..576 4/11 (36%)
Required for polyubiquitination. /evidence=ECO:0000250 607..685 27/71 (38%)
RING-H2_RNF6 630..674 CDD:319587 23/44 (52%)
RING-H2 finger (C3H2C3-type) 632..672 CDD:319587 21/40 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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