DRSC/TRiP Functional Genomics Resources

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Protein Alignment gzl and Rnf130

DIOPT Version :9

Sequence 1:NP_001097695.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001277679.1 Gene:Rnf130 / 59044 MGIID:1891717 Length:419 Species:Mus musculus


Alignment Length:369 Identity:98/369 - (26%)
Similarity:157/369 - (42%) Gaps:81/369 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LPSNGLKVYVVPARRPYYGCDSLDR---PPHLKYPPSAKFVALVARGECVFERKIRVAQNASYSA 114
            ||.:|:        ..:.|||...|   ||::|     :::||:.||.|.|:.||..|...:..|
Mouse    78 LPIHGV--------ADHLGCDPQTRFFVPPNIK-----QWIALLQRGNCTFKEKISRAAFHNAVA 129

  Fly   115 VIVYNNEGDDLEQMSAENITGIRIPSVFVGHTTGKALATYFTTEVVLIINDELPFNINTQLILP- 178
            |::|||:..:.........|| .|.:|.:....||.:.:|            |..||:.|:.:. 
Mouse   130 VVIYNNKSKEEPVTMTHPGTG-DIIAVMITELRGKDILSY------------LEKNISVQMTIAV 181

  Fly   179 --------FS----ILIGMCFIIMVI--------YMIYKC------IREQRRLRRHRLPKSMLKK 217
                    ||    :.:.:.||:::|        |.|.|.      .|.||||  ....|..:.|
Mouse   182 GTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRL--GDAAKKAISK 244

  Fly   218 LPVLRYTKNN--ANNKYDTCVICLEDFIEDDKLRVLPCSHPYHTHCIDPWLTENRRVCPICKRKV 280
            |......|.:  .:..:|.|.:|:|.:.::|.:|||||.|.:|..|:||||:|: ..||:||..:
Mouse   245 LTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEH-CTCPMCKLNI 308

  Fly   281 FTKGEARASRSRQPSLDNVTDTDDDTTPLLQQQQSNGR-QVGQVSSASSAGGAAGSSSSVAAAA- 343
            .   :|.......|..|||.   .|...|.:.|..|.| .:|.::..||.|.....:|.::... 
Mouse   309 L---KALGIVPNLPCTDNVA---FDMERLTRTQAVNRRAALGDLAGDSSLGLEPLRTSGISPLPQ 367

  Fly   344 ------------VAGTTRHGTFRRGHAGRNPFEESQSSDDENAL 375
                        :|.|:.|...:...:.|:...||:.|..|.:|
Mouse   368 DGELTPRTGEINIAVTSGHVFHQNSLSPRSLVYESEFSTIEPSL 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gzlNP_001097695.1 PA_C_RZF_like 14..171 CDD:239038 32/120 (27%)
zf-RING_2 233..277 CDD:290367 20/43 (47%)
Rnf130NP_001277679.1 PA_GRAIL_like 40..179 CDD:239037 35/126 (28%)
HRD1 <197..>306 CDD:227568 36/111 (32%)
RING-H2_RNF130 262..310 CDD:319717 22/51 (43%)
RING-H2 finger (C3H2C3-type) 264..304 CDD:319717 19/40 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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