DRSC/TRiP Functional Genomics Resources

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Protein Alignment gzl and rnf150a

DIOPT Version :10

Sequence 1:NP_649653.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001139044.1 Gene:rnf150a / 559804 ZFINID:ZDB-GENE-060213-1 Length:418 Species:Danio rerio


Alignment Length:458 Identity:108/458 - (23%)
Similarity:199/458 - (43%) Gaps:95/458 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RSCQILT----LLGLC---LVCHEATLVGG--------HVLVYRKATSQLIEEFNDLPAQFGPNL 53
            ::|:.|.    ||..|   |:|.:.|:...        ::......||::..:.::. .::|.:.
Zfish     7 QACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYLDPVTSEIKTDRSEC-GRYGEHS 70

  Fly    54 PSNGLKVYV-VPARRPYYGCDSLDR-P-PHLKYPPSAKFVALVARGECVFERKIRVAQNASYSAV 115
            |....:.:| :|..|  ..||...| | ||    ||..::||:|:|.|.|..|||.|...:.|||
Zfish    71 PKRDARGFVFMPQDR--QACDGNTRFPLPH----PSIPWIALIAKGNCTFREKIRHAAALNASAV 129

  Fly   116 IVYN------NEGDDLEQMSAENITGIRIPSVFVGHTTGKALATYFTTEVVLIINDELPFNINTQ 174
            :::|      |:...:......::..|.||     ...|:.:.......:.:.::    .:|.|:
Zfish   130 VIFNVGSSNSNDTITMPHHGTGDVVAIMIP-----EPKGREIMALLEKNITVAMH----ISIGTR 185

  Fly   175 LILPF-----SILIGMCFIIMVI----YMIYKCI----------REQRRLRRHRLPKSMLKKLPV 220
            .:..:     .:.:.:.||:::|    ::::..|          |.||||  ....|..:.||.|
Zfish   186 NLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRSQRRL--GDAAKKAISKLQV 248

  Fly   221 --LRYTKNNANNKYDTCVICLEDFIEDDKLRVLPCSHPYHTHCIDPWLTENRRVCPICKRKVFTK 283
              :|......::.:|.|.:|:||:..:|.:|:|||.|.:|.:|:|||| ::.|.||:||..:.  
Zfish   249 RTIRKGDKETDSDFDNCAVCIEDYKPNDVVRILPCRHVFHRNCVDPWL-QDHRTCPMCKMNIL-- 310

  Fly   284 GEARASRSRQPSLDNVTDTDDDTTPLLQQQQSNGRQVGQVSSASSAGGAAGSSSSV--AAAAVAG 346
                    :...:...||..||..|  ..:.|:|:....|:.||..  :.|.||.|  ....:.|
Zfish   311 --------KALGIPPNTDCSDDAPP--DYETSSGQPSIAVTGASEV--SVGESSLVLDQPLRITG 363

  Fly   347 TTRHGTFRRGHAGRNPFEESQS--SDDENALLASTVRPATSSGAHERINPFDRAPNLPAHLAEQL 409
            .:            :.::|..|  :|.|:..:||:.:...|......|.|.:.| .|.:.|.::.
Zfish   364 LS------------HDYQEMNSVPADAESPHIASSEQHQPSMSNDPDIMPMEIA-ELQSDLEQED 415

  Fly   410 TES 412
            .:|
Zfish   416 VKS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gzlNP_649653.1 PA_C_RZF_like 14..171 CDD:239038 38/176 (22%)
RING-H2_RNF13-like 233..278 CDD:438327 21/44 (48%)
rnf150aNP_001139044.1 PA_GRAIL_like 45..180 CDD:239037 34/150 (23%)
RING_Ubox 257..311 CDD:473075 22/64 (34%)
HRD1 <265..401 CDD:227568 44/162 (27%)

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