DRSC/TRiP Functional Genomics Resources

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Protein Alignment gzl and rnf150a

DIOPT Version :9

Sequence 1:NP_001097695.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001139044.1 Gene:rnf150a / 559804 ZFINID:ZDB-GENE-060213-1 Length:418 Species:Danio rerio


Alignment Length:458 Identity:108/458 - (23%)
Similarity:199/458 - (43%) Gaps:95/458 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RSCQILT----LLGLC---LVCHEATLVGG--------HVLVYRKATSQLIEEFNDLPAQFGPNL 53
            ::|:.|.    ||..|   |:|.:.|:...        ::......||::..:.::. .::|.:.
Zfish     7 QACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYLDPVTSEIKTDRSEC-GRYGEHS 70

  Fly    54 PSNGLKVYV-VPARRPYYGCDSLDR-P-PHLKYPPSAKFVALVARGECVFERKIRVAQNASYSAV 115
            |....:.:| :|..|  ..||...| | ||    ||..::||:|:|.|.|..|||.|...:.|||
Zfish    71 PKRDARGFVFMPQDR--QACDGNTRFPLPH----PSIPWIALIAKGNCTFREKIRHAAALNASAV 129

  Fly   116 IVYN------NEGDDLEQMSAENITGIRIPSVFVGHTTGKALATYFTTEVVLIINDELPFNINTQ 174
            :::|      |:...:......::..|.||     ...|:.:.......:.:.::    .:|.|:
Zfish   130 VIFNVGSSNSNDTITMPHHGTGDVVAIMIP-----EPKGREIMALLEKNITVAMH----ISIGTR 185

  Fly   175 LILPF-----SILIGMCFIIMVI----YMIYKCI----------REQRRLRRHRLPKSMLKKLPV 220
            .:..:     .:.:.:.||:::|    ::::..|          |.||||  ....|..:.||.|
Zfish   186 NLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRSQRRL--GDAAKKAISKLQV 248

  Fly   221 --LRYTKNNANNKYDTCVICLEDFIEDDKLRVLPCSHPYHTHCIDPWLTENRRVCPICKRKVFTK 283
              :|......::.:|.|.:|:||:..:|.:|:|||.|.:|.:|:|||| ::.|.||:||..:.  
Zfish   249 RTIRKGDKETDSDFDNCAVCIEDYKPNDVVRILPCRHVFHRNCVDPWL-QDHRTCPMCKMNIL-- 310

  Fly   284 GEARASRSRQPSLDNVTDTDDDTTPLLQQQQSNGRQVGQVSSASSAGGAAGSSSSV--AAAAVAG 346
                    :...:...||..||..|  ..:.|:|:....|:.||..  :.|.||.|  ....:.|
Zfish   311 --------KALGIPPNTDCSDDAPP--DYETSSGQPSIAVTGASEV--SVGESSLVLDQPLRITG 363

  Fly   347 TTRHGTFRRGHAGRNPFEESQS--SDDENALLASTVRPATSSGAHERINPFDRAPNLPAHLAEQL 409
            .:            :.::|..|  :|.|:..:||:.:...|......|.|.:.| .|.:.|.::.
Zfish   364 LS------------HDYQEMNSVPADAESPHIASSEQHQPSMSNDPDIMPMEIA-ELQSDLEQED 415

  Fly   410 TES 412
            .:|
Zfish   416 VKS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gzlNP_001097695.1 PA_C_RZF_like 14..171 CDD:239038 38/176 (22%)
zf-RING_2 233..277 CDD:290367 20/43 (47%)
rnf150aNP_001139044.1 PA_GRAIL_like 45..180 CDD:239037 34/150 (23%)
UPF0233 <194..>219 CDD:299753 3/24 (13%)
zf-RING_2 263..306 CDD:290367 20/43 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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