DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gzl and sip3

DIOPT Version :9

Sequence 1:NP_001097695.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001263152.1 Gene:sip3 / 43747 FlyBaseID:FBgn0039875 Length:626 Species:Drosophila melanogaster


Alignment Length:493 Identity:94/493 - (19%)
Similarity:160/493 - (32%) Gaps:160/493 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 AENITGIRIPSV--FVGHTTGKALATYFTTEVVLIIN-----DELPFNINTQLILPFSILIGMCF 187
            |.|.|.:|.|:|  ..|......|....:|.:..:::     .:.|:......:|...::||:  
  Fly   157 AYNSTLVRGPTVQLVFGFEYAILLTVIASTAIKYVLHAAEMRTDTPWENKAVFLLYTELVIGL-- 219

  Fly   188 IIMVIYMIYKCIREQRRLRRHRLP--------------KSMLKKLPVLRYTKNNANNKY------ 232
            |.:|:|:::..|    ..:.:.||              :..|..:.:.|....|.|..|      
  Fly   220 IKVVLYILFVVI----MAKIYALPMFVFRPMFFTIRNFRKALNDVIMSRRAIRNMNTLYPDATPE 280

  Fly   233 ------DTCVICLEDFIEDDKLRVLPCSHPYHTHCIDPWLTENRRVCPICKRKVFTKGEARASRS 291
                  :.|:||.||.:...|  .|||.|.:||.|:..|. :.::.||.|:..:..         
  Fly   281 ELRQSDNICIICREDMVNHSK--KLPCGHIFHTTCLRSWF-QRQQTCPTCRLNILR--------- 333

  Fly   292 RQPSLDNVTDTDDDTTPLLQQQQSNGRQVGQVSSASSAGGAAGSSSSVAAAAVAGTTRHGTFRRG 356
                    |.|.:.|....|..::.....|....|::....||.....|..||.           
  Fly   334 --------TPTVNSTAMPRQGDEAVAAAAGNPIPAAAGVQPAGGVPPPAPTAVV----------- 379

  Fly   357 HAGRNPFEESQSSDDENALLASTVRP------ATSSG-----------------AHERINPFDRA 398
                   :.:|:..|.|......:.|      ..:||                 ....|:||...
  Fly   380 -------DGNQARADVNVAGGQALPPNFADLFGDASGLPNGLPNLAGLQIPPPPVMPMISPFMIP 437

  Fly   399 PNL-------PAHLAEQLTE------------------SRRSVWSRINF----ASFFRRQPAVIS 434
            |:.       |..:.:.||.                  .|..:...||.    |.....|  ..|
  Fly   438 PHFGYLTPLPPPPIPQDLTNFTDEELRAMEGLQRDHIVQRLKLLQNINLMLDSAGIMMSQ--YQS 500

  Fly   435 VAAPPYLERVESGTSAMG--------LPVTGTIAVAS--------PASNNILNPNLS-------- 475
            ::|...|..|...|:..|        :|.|...|:|.        .|:.:..:|.:.        
  Fly   501 LSARLQLTAVTPATAVNGSADSSVYDMPSTSATAMAQLETHQVTPTAAASSASPTMPAEKVTIED 565

  Fly   476 -GSFKDEDDMPPHRSIYEPIAISTPAADSATVDDSAFL 512
             |:..||||:|...:    .|:|.|.:|:...::|:.|
  Fly   566 LGADADEDDIPSTAT----EAVSIPNSDADFEENSSEL 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gzlNP_001097695.1 PA_C_RZF_like 14..171 CDD:239038 10/47 (21%)
zf-RING_2 233..277 CDD:290367 16/43 (37%)
sip3NP_001263152.1 HRD1 20..>365 CDD:227568 47/233 (20%)
zf-RING_2 287..328 CDD:290367 16/43 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.