DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gzl and Rnf215

DIOPT Version :9

Sequence 1:NP_001097695.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_006251362.1 Gene:Rnf215 / 305478 RGDID:1310738 Length:383 Species:Rattus norvegicus


Alignment Length:84 Identity:31/84 - (36%)
Similarity:45/84 - (53%) Gaps:4/84 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 QRRLRRHRLPKSMLKKLPVLRYTKNNANNKYDTCVICLEDFIEDDKLRVLPCSHPYHTHCIDPWL 266
            :||:.| ||.....::..:.|...:......:||.:||:.|.....||||||.|.:|..|:||||
  Rat   295 KRRVVR-RLASLKTRRCRLSRAAHSLPEPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWL 358

  Fly   267 TENRRVCPICKRKVFTKGE 285
            . .::.||:||..|.  ||
  Rat   359 M-LQQTCPLCKFNVL--GE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gzlNP_001097695.1 PA_C_RZF_like 14..171 CDD:239038
zf-RING_2 233..277 CDD:290367 20/43 (47%)
Rnf215XP_006251362.1 zf-RING_2 325..368 CDD:290367 20/43 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336869
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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