DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gzl and Znrf4

DIOPT Version :9

Sequence 1:NP_001097695.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001020049.1 Gene:Znrf4 / 301127 RGDID:1563631 Length:327 Species:Rattus norvegicus


Alignment Length:388 Identity:83/388 - (21%)
Similarity:129/388 - (33%) Gaps:128/388 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EFNDLPAQFGPNLPSNGLKVYVVPARRPYYGCDSLDRP--PHLKYPPSAKFVALVARGECVFERK 103
            :|.||||..|..:.....:.|::.| ||...|.:::.|  .:....|    :.||....|.:|..
  Rat    36 DFLDLPALLGVPVDPKRARGYLLVA-RPADACLAIEGPGLDNRSLDP----LVLVQPLGCSWEHT 95

  Fly   104 IRVAQNASYSAVIVYNNEGDDLEQMSAENIT-----GIRI--------------PSVFVGHTTGK 149
            .|.|:.|..:|..:.:.....|.......:|     ..|:              |.|.......:
  Rat    96 GRRARRARATAASMGSEAPGQLRVFEDLEVTVRCDQSARVLLPHGEPCPEPECHPVVAASWALAR 160

  Fly   150 ALATYFTTEVVLIINDELPFNINTQLILPFSILIGMCFIIMVIYMIYKCIREQRRLRRHRLPKSM 214
            |||...:|                               :.|:..::..:|.... |...:....
  Rat   161 ALALAAST-------------------------------LFVLRQLWPWVRGWGS-RGTAVKTQT 193

  Fly   215 LKKLPVLRYTKNNANNKYDTCVICLEDFIEDDKLRVLPCSHPYHTHCIDPWLTE-NRRVCPICKR 278
            .:|..|..:|:.:     |.|.|||:|:.|.::|::|||:|.||..|||||.:. .||.||:||:
  Rat   194 CQKAQVRTFTRLS-----DLCAICLDDYEEGERLKILPCAHAYHCRCIDPWFSRAARRSCPLCKQ 253

  Fly   279 KVFTKGEARASRSRQPSLDNVTDTDDDTTPLLQQQQSNGRQVGQVSSASSAGGAAGSSSSVAAAA 343
                               :|..|.|.:|.                     |...|..:.:.   
  Rat   254 -------------------SVASTHDGSTD---------------------GSIGGDEAPLP--- 275

  Fly   344 VAGTTRHGTFRRGHAGRNPFEESQS--SDDENALLASTV-----RPATSSGAHERINPFDRAP 399
                        ||  |.|....|:  ......|||.||     ...||.|..|.:.|.:..|
  Rat   276 ------------GH--RPPIWAIQARLRSRRLELLARTVPCRRCNSTTSLGMAENVAPSEATP 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gzlNP_001097695.1 PA_C_RZF_like 14..171 CDD:239038 30/150 (20%)
zf-RING_2 233..277 CDD:290367 23/44 (52%)
Znrf4NP_001020049.1 Peptidases_S8_S53 31..>93 CDD:299169 16/61 (26%)
zf-RING_2 207..252 CDD:290367 23/44 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I8729
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.