DRSC/TRiP Functional Genomics Resources

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Protein Alignment gzl and Rnf13

DIOPT Version :9

Sequence 1:NP_001097695.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001106884.1 Gene:Rnf13 / 24017 MGIID:1346341 Length:381 Species:Mus musculus


Alignment Length:375 Identity:135/375 - (36%)
Similarity:203/375 - (54%) Gaps:50/375 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QILTLLGLCLVCHEATL-VGGHVLVYRKATSQLIEEFNDLPAQFGPNLPSNGLKVYVVPARRPYY 70
            |:.|:|.:.|......| |...:|.|....:.  :.|.||||:||..||:.|||.:::.: :|..
Mouse    14 QVYTILTVQLFAFLNLLPVEADILAYNFENAS--QTFEDLPARFGYRLPAEGLKGFLINS-KPEN 75

  Fly    71 GCDSLDRPPHLKYPPSAKFVALVARGECVFERKIRVAQNASYSAVIVYNNEGDDLEQMSAENITG 135
            .|:.: .||.||...|..|:.|:.|.:|.|:.|:..||.|.|.|.||:|.:.|||..|.:.:|..
Mouse    76 ACEPI-VPPPLKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIDT 139

  Fly   136 IR---IPSVFVGHTTGKALATYFTTE----VVLIINDELPFNINTQLILPFSILIGMCFIIMVIY 193
            ::   |||||:|.::..:|...||.|    ::|:....||..   ..::||.|::|:|.|::||:
Mouse   140 LKKIDIPSVFIGESSANSLKDEFTYEKGGHIILVPELSLPLE---YYLIPFLIIVGICLILIVIF 201

  Fly   194 MIYKCIREQRRLRRHRLPKSMLKKLPVLRYTKNNANNKYDTCVICLEDFIEDDKLRVLPCSHPYH 258
            ||.|.::::.|.||:||.|..||||||.::.|   .::||.|.||||::.:.||||:|||||.||
Mouse   202 MITKFVQDRHRNRRNRLRKDQLKKLPVHKFKK---GDEYDVCAICLEEYEDGDKLRILPCSHAYH 263

  Fly   259 THCIDPWLTENRRVCPICKRKVFTKGEARASRSRQPSLDNVTDTDDDTTPLLQQQQSNGRQVGQV 323
            ..|:|||||:.::.||:||:||.            ||..   |:|.||.   ..|:.|     ||
Mouse   264 CKCVDPWLTKTKKTCPVCKQKVV------------PSQG---DSDSDTD---SSQEEN-----QV 305

  Fly   324 SSASSAGGAAGSSSSVAAAAVAGTTRHGTFRRGHAGRNPFEESQSSDDEN 373
            |.         .:..:..:|.|.|...|:....|:..|..|.|...||:|
Mouse   306 SE---------HTPLLPPSASARTQSFGSLSESHSHHNMTESSDYEDDDN 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gzlNP_001097695.1 PA_C_RZF_like 14..171 CDD:239038 56/164 (34%)
zf-RING_2 233..277 CDD:290367 25/43 (58%)
Rnf13NP_001106884.1 PA_C_RZF_like 23..180 CDD:239038 55/160 (34%)
RING-H2_RNF167 238..283 CDD:319711 26/44 (59%)
RING-H2 finger (C3H2C3-type) 240..281 CDD:319711 24/40 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 285..381 23/94 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 77 1.000 Domainoid score I8834
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 213 1.000 Inparanoid score I3624
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0001489
OrthoInspector 1 1.000 - - otm43256
orthoMCL 1 0.900 - - OOG6_103040
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1776
SonicParanoid 1 1.000 - - X670
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.760

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