DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gzl and Rnf43

DIOPT Version :9

Sequence 1:NP_001097695.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_766036.2 Gene:Rnf43 / 207742 MGIID:2442609 Length:784 Species:Mus musculus


Alignment Length:530 Identity:123/530 - (23%)
Similarity:191/530 - (36%) Gaps:147/530 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 HEATLVGGHVLVYRKATSQLIEEFNDLPAQFGP----NLPSNGL---KVYVVPAR------RPYY 70
            |...::...|...|.|..:.:  ...:|.:..|    ||...|:   ...|.||.      .|.|
Mouse    27 HTGRVLAAAVESERSAEQKAV--IRVIPLKMDPTGKLNLTLEGVFAGVAEVTPAEGKLMQSHPLY 89

  Fly    71 GCDSLDRPPHLKYPPSAKFVALV-------ARGECV-FERKIRVAQNASYSAVIVYNNEGDDLEQ 127
            .|::.|..   ...|.  |:::|       |...|: ...|.|:|.....:||:....|    ::
Mouse    90 LCNASDDD---NLEPG--FISIVKLESPRRAPRPCLSLASKARMAGERGANAVLFDITE----DR 145

  Fly   128 MSAENI---TGIRIPSVFV-GHTTGKALATYFTTE--VVLIINDELPFNINTQLILPFSILIGMC 186
            .:||.:   .|:..|.|.: |....|.:...:...  .|.|...|.|...|..:.:..:: :|..
Mouse   146 SAAEQLQQPLGLTKPVVLIWGSDAAKLMEFVYKNRKAYVWIELKEPPAGANYDVWILLTV-VGTV 209

  Fly   187 FIIMVIYMIYKCIREQRRLR---RHRLPKSM-------LKKLPVLRY------------TKNNAN 229
            |:|::..::        |:|   .|..|..:       :.:|...||            ...::.
Mouse   210 FVIILASVL--------RIRCRPHHSRPDPLQQRTARAISQLATRRYQAGCRRARAEWPDSGSSC 266

  Fly   230 NKYDTCVICLEDFIEDDKLRVLPCSHPYHTHCIDPWLTENRRVCPICKRKVFTKGEARASRSRQP 294
            :....|.||||:|.|..:|||:.|.|.:|..|:||||.:: |.||:|...: .:|:   |.|:.|
Mouse   267 SSTPVCAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQH-RTCPLCMFNI-VEGD---SFSQAP 326

  Fly   295 SLDNVTDTDDDTTPLLQQ--------QQSNGRQVGQVSSASSAGGAAGSSSSVAAAAVAGTTRHG 351
            :          .:|..|:        :|..|.....:.||...|.:..|        ||.|.|  
Mouse   327 A----------ASPSYQEPGRRLHLIRQHPGHAHYHLPSAYLLGPSRTS--------VARTPR-- 371

  Fly   352 TFRRGHAGRNPFEESQSSDDENALLASTVRPATSSGAHERI--NPFDRAPNLPAHLAEQLTESRR 414
                    ..||..||             .|:..| .|:|:  ....|||....|||.. .....
Mouse   372 --------PRPFLPSQ-------------EPSMGS-RHQRLPRTSHLRAPEEQQHLAVS-PHPYA 413

  Fly   415 SVW--SRINFASFFRRQPAVISVA---APPYLERVESG----TSAMGLPVTGTIAVASPASNNIL 470
            ..|  :|:...|   :.||...||   |.|: |...||    |...|....|      |||::..
Mouse   414 QGWGLNRLRCTS---QHPAACPVALRRARPH-ESSGSGESYCTERSGYLADG------PASDSSS 468

  Fly   471 NPNLSGSFKD 480
            .| ..||..|
Mouse   469 GP-CHGSSSD 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gzlNP_001097695.1 PA_C_RZF_like 14..171 CDD:239038 38/178 (21%)
zf-RING_2 233..277 CDD:290367 21/43 (49%)
Rnf43NP_766036.2 zf-RING_2 270..312 CDD:290367 21/42 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..407 18/74 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 459..478 8/26 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 516..671
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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