DRSC/TRiP Functional Genomics Resources

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Protein Alignment gzl and rnf150

DIOPT Version :9

Sequence 1:NP_001097695.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001135553.1 Gene:rnf150 / 100216098 XenbaseID:XB-GENE-5993052 Length:427 Species:Xenopus tropicalis


Alignment Length:410 Identity:103/410 - (25%)
Similarity:172/410 - (41%) Gaps:92/410 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RSCQILT----LLGLC---LVCHEATLVGGH----VLVYRKATSQLIEEFNDLPAQFG----PNL 53
            ::|:.|.    ||..|   |:|.:.|:....    ..|....|..|..::....::.|    .:|
 Frog     7 QACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYTDPLSHQWRTEKSECGRYGEHSL 71

  Fly    54 PSNGLKVYVVPAR-RPYYGCDSLDRPPHLKY--PPSA-KFVALVARGECVFERKIRVAQNASYSA 114
            ..:...:.|:|:. :....||     |..|:  |.:| ::|||:.:|.|.:..||:.|...:.||
 Frog    72 KQDAWGLAVMPSSPQDRLACD-----PATKFSVPANASRWVALIPKGNCTYRDKIKHAALQNASA 131

  Fly   115 VIVYN------NEGDDLEQMSAENITGIRIPSVFVGHTTGKALATYFTTEVVLIINDELPFNINT 173
            |::||      ||...:.....|:|..|.||     ...|:.:||.....    ||..:...|.|
 Frog   132 VLIYNVGSSNANETITMPHPGIEDIVAIMIP-----EPKGREIATLLERN----INVTIYITIGT 187

  Fly   174 QLILPF-----SILIGMCFIIMVI----YMIYKCI----------REQRRLRRHRLPKSMLKKLP 219
            :.:..:     .:.:.:.||:::|    ::::..|          |.||||  ....|..:.||.
 Frog   188 RNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRL--GDAAKKAISKLQ 250

  Fly   220 VLRYTKNNANN--KYDTCVICLEDFIEDDKLRVLPCSHPYHTHCIDPWLTENRRVCPICKRKVFT 282
            |....|.:...  ::|.|.:|:|.:..:|.:|:|||.|.:|..|:||||.:: |.||:||..:..
 Frog   251 VRTIKKGDKETEPEFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDH-RTCPMCKMNILK 314

  Fly   283 ------------------KGEARASRSRQPSLDNVT--------DTDDDTTPLLQ--QQQSNGRQ 319
                              :|......::.....:||        |....|..:||  |...:..|
 Frog   315 ALGIPPNADCLDDIPPDFEGSVGPPTNQITGASDVTVNESSVGIDPSVRTVGVLQVIQDAESLPQ 379

  Fly   320 VGQVS-SASSAGGAAGSSSS 338
            ||:|| :|||....|.||.|
 Frog   380 VGEVSYTASSEQEPAVSSDS 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gzlNP_001097695.1 PA_C_RZF_like 14..171 CDD:239038 42/177 (24%)
zf-RING_2 233..277 CDD:290367 19/43 (44%)
rnf150NP_001135553.1 PA_GRAIL_like 45..183 CDD:239037 37/151 (25%)
UPF0233 <197..>222 CDD:299753 3/24 (13%)
zf-RING_2 266..309 CDD:290367 19/43 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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