DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1024 and CG6791

DIOPT Version :10

Sequence 1:NP_001138014.2 Gene:CG1024 / 40789 FlyBaseID:FBgn0027514 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_650090.1 Gene:CG6791 / 41391 FlyBaseID:FBgn0037918 Length:1243 Species:Drosophila melanogaster


Alignment Length:674 Identity:142/674 - (21%)
Similarity:229/674 - (33%) Gaps:218/674 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KMSRNVTLSDEQSRLNA--------RLEAHMVYICPECGKAFRTQAEWRQHLNTKHDYLKKTYSD 60
            ::...:::....|::||        ..|..:|||||.||..||.|..|::|:|..|.|  .|...
  Fly   133 RLGSGLSVRPTTSQINATDENGVPINYELGVVYICPACGGEFRQQDHWKRHMNHIHKY--NTLRG 195

  Fly    61 FNFIQIDERFHECQLCFKWVENAHKTIALLQYHYFMHLEHSETYRCVHCRMAYTRRRALNVHLLD 125
            .||..:|:.:..|:.|.|.:. .|....||: |.|.||....| :|..|:..|..|:.|.|||..
  Fly   196 LNFTPLDKLYQRCRECNKRIA-MHSRENLLK-HKFTHLPFRCT-KCYICKREYKYRQDLMVHLRM 257

  Fly   126 THMREI-----EKY----------ENKLRQMKRQQA---------------------KPTTAAAP 154
            .|..|:     |.|          |::..|:.|:::                     :|.  |..
  Fly   258 VHCDEVVAMMREGYNAAGRKTRVRESRTEQLLREKSFRENDDLGEESDRIEVRNELLEPD--ADE 320

  Fly   155 AGNAEKPMAVKPRGRPKGSTNRKQ--NDLLQKALMD--IDLNTEMEKS----------------- 198
            :|..|:.::.:...:..|:....:  .|.:.....|  .|.:|..:.|                 
  Fly   321 SGTQEQTVSEEVSKKKAGTRGAAELCEDYIHYMCPDCGTDCDTHAQWSQHIEFVHDYVSRRGLNF 385

  Fly   199 -----------------PVTALAAPVNEPKPISNVSELNLDRCLNAYEDIVRKEEKEVVPK--YD 244
                             |.|..:...::...:|....|....|...|.|     .:|::..  ..
  Fly   386 RSVDMQMQCLECKKIVTPNTIKSLRAHKFSHLSQPEWLRCKLCYKGYTD-----HQEIIRHLLQQ 445

  Fly   245 DELDALCKEFFD----DGPSA---------GKGEANEEQQQDDAHLQQGNQEVVIIEIDALGKEE 296
            ..:|.|..|..:    |.|||         |.||.|.....:|:..                .|:
  Fly   446 HHMDTLMSEDAEEEDGDAPSAIEDECDGDNGNGEGNGAPLDEDSPY----------------FED 494

  Fly   297 VAQLKKEMKSDPISQPTKRRRISTTPSRDSDTEMSTNGLTKLISYLCPKCGKEIASMDGWRAHVF 361
            ..:....:.||.|.:|.                         |.||||:||||......||.||.
  Fly   495 APRRGGRISSDDIFEPH-------------------------IDYLCPQCGKEFIEKKHWRTHVV 534

  Fly   362 KKHDFEHIIENSFKILESGRKAMCLQCREVQPTTVRSQ-LQKHCFKHLPYRSYLKCTLCDRTKTS 425
            ..|....:.:.:|:::.. |:..|.:|.::.......| .|:|...|||:::|.:|..|.::.|.
  Fly   535 MAHSMNDLSKLNFEMINE-RQLKCTECDKIITNAYGIQNAQQHRITHLPFKAYARCRKCHKSYTD 598

  Fly   426 TSKILNHIRYNHQEELQRKNKTQLLIKPEPMWASPNKSGQAAM---------------ADDAGSE 475
            ...::.|:..:|:....||.....   |.|: .:|.|..:..:               .|..|.|
  Fly   599 RKGLVKHLATHHRVGWPRKLSGGC---PAPI-LTPAKQPRKQIVTVANETYEIIYLDDVDQGGME 659

  Fly   476 DDQ--GEQA-------------------------------VCEHCDRVFRSKWRYERHIAS--CR 505
            :|.  |||.                               .|.||..:|.::.....||:.  ||
  Fly   660 EDNDFGEQMQAEEDEYPIAPPPPSPPPPPQPTTQGNHQRYKCVHCGTLFATQAAVRVHISEKRCR 724

  Fly   506 R-----------SGAGKSVEGTVE 518
            :           |.|..||. |||
  Fly   725 KTVVRRRRQPVMSSADPSVP-TVE 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1024NP_001138014.2 C2H2 Zn finger 30..51 CDD:275368 10/20 (50%)
C2H2 Zn finger 73..100 CDD:275368 10/26 (38%)
C2H2 Zn finger 106..123 CDD:275368 6/16 (38%)
CG6791NP_650090.1 C2H2 Zn finger 167..188 CDD:275368 10/20 (50%)
C2H2 Zn finger 208..230 CDD:275368 8/23 (35%)
C2H2 Zn finger 235..256 CDD:275368 8/21 (38%)
C2H2 Zn finger 516..532 CDD:275368 8/15 (53%)
C2H2 Zn finger 557..580 CDD:275368 5/22 (23%)
C2H2 Zn finger 589..609 CDD:275368 4/19 (21%)
COG5236 <939..>1096 CDD:227561
Blue background indicates that the domain is not in the aligned region.

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