DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42564 and AT4G33720

DIOPT Version :10

Sequence 1:NP_649651.2 Gene:CG42564 / 40788 FlyBaseID:FBgn0260766 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_195098.1 Gene:AT4G33720 / 829514 AraportID:AT4G33720 Length:163 Species:Arabidopsis thaliana


Alignment Length:133 Identity:32/133 - (24%)
Similarity:59/133 - (44%) Gaps:37/133 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 MGTLKWNPELAYLAE--FNVR--DCVLRHDECRNTKFTQNAGQTVG-YRGIKGKLPELEDILRDI 181
            :|.|:|:.::|..|.  .|.|  ||.::|.   :..:.:|...:.| ..|:..            
plant    46 VGPLRWDEKVAAYARNYANQRKGDCAMKHS---SGSYGENIAWSSGSMTGVAA------------ 95

  Fly   182 IGVWLREKSRTSMVNIMKYVEQESQSPKY-----NFLQIVLENAESVGCAIVQQSRHGWIQTFFA 241
            :.:|:.|:        ..| :.:|.:..:     ::.|:|..|:|.:|||.| :..:|  |||..
plant    96 VDMWVDEQ--------FDY-DYDSNTCAWDKQCGHYTQVVWRNSERLGCAKV-RCNNG--QTFIT 148

  Fly   242 CNY 244
            |||
plant   149 CNY 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42564NP_649651.2 CAP_euk 95..245 CDD:349399 32/133 (24%)
AT4G33720NP_195098.1 CAP_PR-1 30..163 CDD:349400 32/133 (24%)

Return to query results.
Submit another query.