DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42564 and Glipr2

DIOPT Version :10

Sequence 1:NP_649651.2 Gene:CG42564 / 40788 FlyBaseID:FBgn0260766 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_081726.1 Gene:Glipr2 / 384009 MGIID:1917770 Length:154 Species:Mus musculus


Alignment Length:139 Identity:28/139 - (20%)
Similarity:44/139 - (31%) Gaps:46/139 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 LLRRFNELRDSVAKGGFNGLSPASRMGTLKWNPELAYLAEFNVRDCVLRHD------ECRNTKFT 155
            :|:..||.|..      :|:.|...  ..|.|.|....:|......:|:|.      :|......
Mouse    13 VLKAHNEYRAQ------HGVPPLKL--CKKLNREAQQYSEALASTRILKHSPESSRGQCGENLAW 69

  Fly   156 QNAGQTVGYRGIKGKLPELEDILRDIIGVWLREKSRTSMVNIMKYVEQESQSPKY-----NFLQI 215
            .:..||       ||         |:...|..|        |..|   ..|.|.:     :|..:
Mouse    70 ASYDQT-------GK---------DVADRWYSE--------IKSY---NFQQPGFTSGTGHFTAM 107

  Fly   216 VLENAESVG 224
            |.:|.:.:|
Mouse   108 VWKNTKKIG 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42564NP_649651.2 CAP_euk 95..245 CDD:349399 28/139 (20%)
Glipr2NP_081726.1 CAP_GAPR1-like 8..139 CDD:349401 28/139 (20%)
Interaction with CAV1. /evidence=ECO:0000250 91..98 2/6 (33%)

Return to query results.
Submit another query.