DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42564 and Glipr1l2

DIOPT Version :10

Sequence 1:NP_649651.2 Gene:CG42564 / 40788 FlyBaseID:FBgn0260766 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_001419286.1 Gene:Glipr1l2 / 366890 RGDID:1310205 Length:318 Species:Rattus norvegicus


Alignment Length:223 Identity:49/223 - (21%)
Similarity:86/223 - (38%) Gaps:51/223 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LHDKCSLDAELIVISPKVERFLLRRFNELRDSVAKGGFNGLSPASRMGTLKWNPELAYLAEFNVR 140
            |:.|..|:.::..|:..|     ...||||.:|...|.|       :..:.|:..|:..|....:
  Rat    40 LNAKLPLEEDVDFINEYV-----NLHNELRGTVFPPGVN-------LRFMTWDVALSRTARAWGK 92

  Fly   141 DCVLRHDECRNTKFTQNAGQTVGYRGIKGKLPELEDILRDI-IGVWLREKSRTSMVNIMKYVEQE 204
            .||..    |||..              .|:.|...:..|| ..:|:..:...:..|.::...:|
  Rat    93 KCVFE----RNTHL--------------DKVHESHPVFTDIGENMWVGPEKDFTATNAIRSWHEE 139

  Fly   205 SQSPKY------------NFLQIVLENAESVGCAIVQQSRHGWI--QTFFACNYGHAPVVGSPVY 255
            .:|..|            :::|:|.:::..||||:...::.|.|  ...|.|||  ||  |..:.
  Rat   140 RKSYNYVNDTCIEDEDCSHYIQLVWDHSYKVGCAVTPCAKVGAITYAALFICNY--AP--GGTLT 200

  Fly   256 EPGKKAAESCKTGANPKYA--HLCAESE 281
            ....:|.:.|....|.:..  .||..::
  Rat   201 RRPYQAGQFCSRCTNEEKCIDFLCGNAD 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42564NP_649651.2 CAP_euk 95..245 CDD:349399 35/164 (21%)
Glipr1l2NP_001419286.1 CAP 51..197 CDD:412178 40/179 (22%)

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