DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42564 and CG16995

DIOPT Version :10

Sequence 1:NP_649651.2 Gene:CG42564 / 40788 FlyBaseID:FBgn0260766 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_608668.2 Gene:CG16995 / 33413 FlyBaseID:FBgn0031412 Length:146 Species:Drosophila melanogaster


Alignment Length:158 Identity:33/158 - (20%)
Similarity:58/158 - (36%) Gaps:44/158 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 ERFLLRRFNELRDSVAKGGFNGLSPASRMGTL--KWNPELAYLAEFNVRDCVLRHDECRNTKFTQ 156
            |:.:|:..|..|   ||.|...|:.:.::..|  :|   ..||...|      |.:..:|:.:.:
  Fly     7 EQEVLQAHNLYR---AKHGAQPLTLSPKLNRLATEW---ANYLLSRN------RMEHRQNSGYGE 59

  Fly   157 NAGQTVGYRGIKGKLPELEDILRDIIGVWLREKSRTSMVNIMKYVEQESQSPKY-----NFLQIV 216
            |.....| ..:||         .|.:..|..|        |.:|   ...||.:     :|.|:|
  Fly    60 NIYMASG-GNLKG---------ADAVRSWYEE--------IRQY---NWNSPSFQGNTGHFTQVV 103

  Fly   217 LENAESVGCAIVQQSRHGWIQTFFACNY 244
            .:::..:|....:...    ..:..|||
  Fly   104 WKSSTELGVGFAKSGS----TIYVVCNY 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42564NP_649651.2 CAP_euk 95..245 CDD:349399 32/157 (20%)
CG16995NP_608668.2 CAP_GAPR1-like 5..125 CDD:349401 30/154 (19%)

Return to query results.
Submit another query.