DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42564 and scl-21

DIOPT Version :10

Sequence 1:NP_649651.2 Gene:CG42564 / 40788 FlyBaseID:FBgn0260766 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_507793.1 Gene:scl-21 / 189870 WormBaseID:WBGene00012816 Length:198 Species:Caenorhabditis elegans


Alignment Length:238 Identity:52/238 - (21%)
Similarity:87/238 - (36%) Gaps:71/238 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VACNASIELHDKCSLDAELIVISPKVERFLLRRFNELRDSVAKGGFN-------GLSPASRMGTL 125
            :.|.|::.:|.:.|..|:..:::         ..|:||..||...|:       .|.|||.|..:
 Worm     6 IFCLAAVSVHAQFSASAQKEIVT---------YINDLRSLVASRRFHLDSRDVETLPPASDMLKM 61

  Fly   126 KWNPELAYLAEFNVRDCVLRHDECRNTKFTQNAGQTVGYRGIKGKLPELED----------ILRD 180
            .||..||..|:...:.|.:                     .::...|.:.|          :.::
 Worm    62 TWNSTLAVAAQKLAKTCFI---------------------AVESSSPGIADKRIVAANVVTVAKN 105

  Fly   181 IIGVWLREKSRTSMVNIMKYVEQESQSPKYNFLQIVLENAESVGCA-----IVQQSRHGWIQTFF 240
            .:|.|  :.|.....|:..|      :..|..:|::...:.||||.     |..|.|. |.:.  
 Worm   106 ALGHW--KHSLNKEWNLKSY------NSNYIGIQLIWAKSSSVGCGFSPCEIDSQGRR-WYKV-- 159

  Fly   241 ACNY-GHAPVVGSPVYEPGKKAAESCKTGANPKYAHLCAESEV 282
            .|:: ....:...|||:.| ||.|:|..|..      ||...|
 Worm   160 VCSFEKKGGITREPVYKKG-KACEACPAGTK------CASGSV 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42564NP_649651.2 CAP_euk 95..245 CDD:349399 35/172 (20%)
scl-21NP_507793.1 CAP_euk 23..163 CDD:349399 35/180 (19%)

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