DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42564 and scl-11

DIOPT Version :10

Sequence 1:NP_649651.2 Gene:CG42564 / 40788 FlyBaseID:FBgn0260766 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_502499.1 Gene:scl-11 / 186050 WormBaseID:WBGene00009892 Length:207 Species:Caenorhabditis elegans


Alignment Length:203 Identity:38/203 - (18%)
Similarity:70/203 - (34%) Gaps:52/203 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 NELRDSVAKGGFNGLSPASRMGT----LKWNPELAYLAEFNVRDCVLRHDECRNTKFTQNAGQTV 162
            |:||.|:|||.:.......:.|:    :||:..:|..|:.....|...|.:      ....|:.:
 Worm    31 NKLRSSIAKGTYVAKGTTQKSGSNMRKIKWDATVATSAQNYANTCPTGHSQ------GSGYGENL 89

  Fly   163 GYRGIKGKLPELEDILRDIIGVWLREKSRTSMVNIMKYVEQESQSPKYNF--------------- 212
            .:....|.:..|:.........|                  ||:..:|.:               
 Worm    90 YWYWTSGTIGNLDTFGPAASSSW------------------ESEFQQYGWTSNTLDMNTFNTGIG 136

  Fly   213 --LQIVLENAESVGCAIV---QQSRHGWIQTFFACNYGHAP--VVGSPVYEPGKKAAESCKTGAN 270
              .|:...|..::||.:.   :...:|:.:....|.| ..|  .:..|:|:.|...| :|.:|..
 Worm   137 HATQMAWANTFAIGCGVKNCGKDPSNGYNKVAVVCQY-KTPGNYLNQPIYQQGTTCA-ACPSGTA 199

  Fly   271 PKYAHLCA 278
            ...:.|||
 Worm   200 CDSSGLCA 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42564NP_649651.2 CAP_euk 95..245 CDD:349399 27/166 (16%)
scl-11NP_502499.1 SCP 21..173 CDD:214553 27/165 (16%)

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