DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42564 and scl-15

DIOPT Version :10

Sequence 1:NP_649651.2 Gene:CG42564 / 40788 FlyBaseID:FBgn0260766 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_494496.1 Gene:scl-15 / 184099 WormBaseID:WBGene00017183 Length:207 Species:Caenorhabditis elegans


Alignment Length:226 Identity:45/226 - (19%)
Similarity:84/226 - (37%) Gaps:42/226 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VACNASIELHDKCSLDAELIVISPKVERFLLRRFNELRDSVAKGGF----NGLSPASRMGTLKWN 128
            :|..||:.::.:.|...:..::.         ..|.||.|:|||.:    ....|.|.:..:||:
 Worm     7 LAVVASVSVYGQFSKAGQKAIVD---------AHNTLRSSIAKGTYVANKTRKEPGSNILKMKWD 62

  Fly   129 PELAYLAEFNVRDCVLRHDECRNTKFTQNAGQTVGYRGIKGKLPELEDILRDIIGVWLREKSRTS 193
            |.:|..|:.....|...|.:   :|:    |:.:.:|.....:..::|......|.|..|     
 Worm    63 PTIAKSAQAYANTCPTGHGK---SKY----GENLYWRWSGAVIKSIDDYGVRASGAWASE----- 115

  Fly   194 MVNIMKYVEQESQSPKYNF-------LQIVLENAESVGCAIVQ--QSRHGWIQTFFACNY-GHAP 248
               ..||..:.::.....|       .|:...:..|:||.:..  ..::...:....|.| ....
 Worm   116 ---FQKYGWKTNKLDSALFKTGIGHATQMAWASTGSIGCGVKNCGMDKNKMYKVAVVCQYSARGN 177

  Fly   249 VVGSPVYEPGKKAAESC--KTGANPKYAHLC 277
            ::.:.:|..| |...:|  ||... |...||
 Worm   178 MINNNIYTAG-KTCSACPAKTKCE-KATGLC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42564NP_649651.2 CAP_euk 95..245 CDD:349399 32/163 (20%)
scl-15NP_494496.1 SCP 22..173 CDD:214553 31/174 (18%)

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