DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42564 and scl-23

DIOPT Version :10

Sequence 1:NP_649651.2 Gene:CG42564 / 40788 FlyBaseID:FBgn0260766 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_499859.3 Gene:scl-23 / 182028 WormBaseID:WBGene00015246 Length:330 Species:Caenorhabditis elegans


Alignment Length:292 Identity:61/292 - (20%)
Similarity:101/292 - (34%) Gaps:90/292 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VFLIASCLTI--QTAATTTPSPA----VTEAGHPSPGGSQGQEEPGNSSSTELPDYCDPSLCHKE 64
            ||:..:.:|:  ...|.:||.|:    :|:..                     |.||        
 Worm    78 VFIAVTVITLSYNILAASTPRPSRFSVITKMA---------------------PAYC-------- 113

  Fly    65 LKHVACNASIELHDKCSLDAELIVISPKVERFLLRRFNELRDSVAKGGF----NGLSPASRMGTL 125
                          :.:|.|.|       :..:|.:.||:|..||.|.:    :.|.||..|..|
 Worm   114 --------------RLNLPARL-------QNLILDKHNEIRSQVALGQYAVDDDYLPPADNMVKL 157

  Fly   126 KWNPELAYLAEFNVRDCVLRHDECRNTKFTQNAG-QTVGYRGIKGKLP---ELEDILRDIIGVWL 186
            .|:.||...|:...:.|.|:         .:|:| |..|:..::|:..   ...|.| |:.|..|
 Worm   158 DWDCELELEAQQRAQQCNLQ---------KENSGRQMNGWDEVRGENAFYFRTTDGL-DVSGAVL 212

  Fly   187 REKSR----TSMVNIMKYVEQESQSPKYNFLQIVLENAESVGCAIVQ------QSRHGWIQTFFA 241
            :...|    .::..|.........|...:..||:.:....:|||:.:      .|..|.......
 Worm   213 KGIQRMGDEIAIAGIKNLKLSRYDSRIGHATQILWKETRKLGCAVQECPARQDGSLDGQKYNVAV 277

  Fly   242 CNY---GHAPVVGSP--VYEPGKKAAESCKTG 268
            |.|   |:.....:|  :|..| ..|.:|..|
 Worm   278 CKYYPTGNVFKSSTPTSIYSVG-DVASACSEG 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42564NP_649651.2 CAP_euk 95..245 CDD:349399 40/170 (24%)
scl-23NP_499859.3 CAP_euk 122..281 CDD:349399 39/168 (23%)

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