Protein Alignment CG42564 and vap-1

DIOPT Version :10

• Sequence 1: NP_649651.2
• Gene: CG42564 / 40788
• FlyBaseID: FBgn0260766
• Length: 500
• Species: Drosophila melanogaster
• Sequence 2: NP_001024553.1
• Gene: vap-1 / 181768
• WormBaseID: WBGene00006886
• Length: 424
• Species: Caenorhabditis elegans
• Alignment Length: 282
• Identity: 62/282 - (21%)
• Similarity: 91/282 - (32%)
• Gaps: 77/282 - (27%)

  Fly    56 CDPSLCHKELKHVAC---------NASI-ELHDKCSLDAELIVIS---------------PKVER 95
            |..:||..:|. :.|         ||.| |..|.|:.|||....|               |.||.
 Worm   158 CAYALCAGKLS-INCIYNKIGYMTNAIIYEKGDACTSDAECTTYSDSQCKNGLCYKAPQAPVVET 221

  Fly    96 F----------------LLRRFNELRDSVAKG-GFNGLSPASRMGTLKWNPELAY--LAEFNVR- 140
            |                .|...|:||.|:||| ..:|::..:.....|..|:|.|  ..|.|.|
 Worm   222 FTMCPSVTDQSDQARQNFLDTHNKLRTSLAKGLEADGIAAGAFAPMAKQMPKLKYSCTVEANART 286

  Fly   141 ---DCVLRHDECRNTKFTQNAGQTVG-----YRGIKGKLPELEDILRDIIGVWLREKS--RTSMV 195
               .|:.:|         ..:.|..|     |......:|::: ...|....|..|..  .....
 Worm   287 WAKGCLYQH---------STSAQRPGLGENLYMISINNMPKIQ-TAEDSSKAWWSELKDFGVGSD 341

  Fly   196 NIMKYVEQESQSPKYNFLQIVLENAESVGCAIVQQSRHGWIQTFFACNYGHA-PVVGSPVYEPGK 259
            ||:.....:.....|.  |:..|....:||.:......    |:..|.||.| ..:...:|..|
 Worm   342 NILTQAVFDRGVGHYT--QMAWEGTTEIGCFVENCPTF----TYSVCQYGPAGNYMNQLIYTKG- 399

  Fly   260 KAAESCKTGANPKYAHLCAESE 281
               ..|...|:......|:.:|
 Worm   400 ---SPCTADADCPGTQTCSVAE 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42564	NP_649651.2	CAP_euk	95..245	CDD:349399	35/179 (20%)
vap-1	NP_001024553.1	SCP	31..175	CDD:214553	5/17 (29%)
		SCP	234..386	CDD:214553	35/167 (21%)