DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42564 and crispld1

DIOPT Version :10

Sequence 1:NP_649651.2 Gene:CG42564 / 40788 FlyBaseID:FBgn0260766 Length:500 Species:Drosophila melanogaster
Sequence 2:XP_002937123.2 Gene:crispld1 / 100490431 XenbaseID:XB-GENE-989389 Length:514 Species:Xenopus tropicalis


Alignment Length:228 Identity:52/228 - (22%)
Similarity:81/228 - (35%) Gaps:48/228 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 RFLLRRFNELRDSVAKGGFNGLSPASRMGTLKWNPELAYLAEFNVRDCVLRHDECRNTKFTQNAG 159
            :.:|...|:||..|       ..|||.|..:.|:.||...||.....|:..|..   .......|
 Frog    63 KLILDLHNKLRGEV-------YPPASNMEFMIWDVELERSAEAWAETCLWEHGP---ADLLPVIG 117

  Fly   160 QTVG-----YRGIKGKLPELEDILRDIIGVWLREKSRTSMVNIMKYVEQESQSPK-YNFLQIVLE 218
            |.:|     ||.....:....|.:||....:.:|..        .|.......|. .::.|:|..
 Frog   118 QNLGAHWGRYRPPTYHVQAWYDEVRDYTFPYPQECD--------PYCPFRCSGPVCTHYTQLVWA 174

  Fly   219 NAESVGCAI-VQQSRHGWIQ-----TFFACNY-------GHAPVVGSPVYEPGKKAAESCKTGAN 270
            .:..:|||| :..:.:.|.|     .:..|||       ||||      |:.|...: :|.    
 Frog   175 TSSRIGCAINLCHNMNVWGQIWPKAIYLVCNYSPKGNWWGHAP------YKHGHPCS-ACP---- 228

  Fly   271 PKYAHLCAESEVYEKVTPKAGNASSPEIKTRTL 303
            |.|...|.::..|:..:........||.:|..:
 Frog   229 PSYGGGCKDNLCYKDGSDLHYPLPEPEEETNEI 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42564NP_649651.2 CAP_euk 95..245 CDD:349399 38/168 (23%)
crispld1XP_002937123.2 CAP_CRISPLD1 62..207 CDD:349407 37/161 (23%)
LCCL 304..388 CDD:128866
LCCL 407..505 CDD:427521
Blue background indicates that the domain is not in the aligned region.

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