DRSC/TRiP Functional Genomics Resources

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Protein Alignment CRAT and Cpt1c

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001344599.1 Gene:Cpt1c / 78070 MGIID:2446526 Length:799 Species:Mus musculus


Alignment Length:661 Identity:185/661 - (27%)
Similarity:301/661 - (45%) Gaps:96/661 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PNGIAKKVLPASSYSTVQKTIPLEQPNLLKY-HVLP------LEETLNRFMTTVEPLLTPEEFQR 104
            |:|....  |..::..:.:......|.|..: ..||      .:||:.:::.:|.|:|..:.|.|
Mouse   139 PHGAMSS--PTKTWLALVRIFSGRHPRLFSFQRALPRQPVPSAQETVRKYLESVRPVLGDDAFDR 201

  Fly   105 QKGITSEFLKKQGRELQLLLEETGSKEKNWLAHRWLKAAYLTYRDPVT----------VFVSPGM 159
            ...:.::||:.....|||.|:.......|:::..|.:..||..|..:.          ::|:|  
Mouse   202 ATALANDFLRLHAPRLQLYLQLKSWCTSNYVSDWWEEFVYLRSRGSLINSTYYMMQDFLYVTP-- 264

  Fly   160 TFPKQNFRDSRAFVDYTARVIYGLGEFNDMVHANKI-PIVKMGKNELDNSQFGKVFGTCRIPRRG 223
             .|.|..|...|        ::.|..:..:::..:| |.:.||...|.::|:.::|.|.|||...
Mouse   265 -TPLQAARAGNA--------VHTLLLYRHLLNRQEISPTLLMGMRPLCSAQYERMFNTTRIPGVE 320

  Fly   224 TDEIVYNPDSDYVVVIYKNHFYQLKIYSKEGKLIAAPCLAAQLENIVLKETQVGVP----YGILT 284
            .|.:.:..||.:|.|.::..|:::..:|..| |::...|..|.::| |.:.....|    ...||
Mouse   321 KDHLRHLQDSRHVAVFHRGRFFRVGTHSPNG-LLSPRALEQQFQDI-LDDPSPACPLEEHLAALT 383

  Fly   285 TDSRDNWAEAYEYLVETPGNRDALKTIQGALFTVSLDE--GTILKE--GEETDELILSLIHGSGS 345
            ...|..||:..| .|:|.. ..||:.::||.|.||||.  ..:.:|  ....|....:|:.|.|.
Mouse   384 AAPRSMWAQVRE-SVKTHA-ATALEAVEGAAFFVSLDSEPAGLTREDPAASLDAYAHALLAGRGH 446

  Fly   346 KINSGNRWMDKTIQLVVNPNGNVGFTYEHS----PAEGQ-------PIAMMMDYVVQ---KMKED 396
                 :||.||:..|:|..||.:|.:.|||    |..|.       .....:.|...   |...|
Mouse   447 -----DRWFDKSFTLIVFSNGKLGLSVEHSWADCPVSGHLWEFTLATECFQLGYATDGHCKGHPD 506

  Fly   397 PSFGQSGSQDFAPAQKIQFSSSNKSLEKSLNVAQENVDKLADALQMKVLKFNGFGKDFIKKQRLG 461
            |:..|        .|::|:... :.::.|:::|......|:..:...|..|:.|||.|||...:.
Mouse   507 PTLPQ--------PQRLQWDLP-EQIQPSISLALRGAKTLSGNIDCHVFPFSHFGKSFIKCCHVS 562

  Fly   462 PDSFVQMALQLAFYKMHSEPPAQYESAHLRIFDGGRTETIRSCSNESLAFSRAMQDPNVTDQERA 526
            .|||:|:.||||.::...:....||||..|:|..|||||:|||:.|:..|.||| |...|||...
Mouse   563 SDSFIQLVLQLAHFRDRGQFCLTYESAMTRLFLEGRTETVRSCTREACQFVRAM-DNKETDQHCL 626

  Fly   527 AKLREAVVSHQTYAKLALQGKGVDRHLLGLKLMA-LEHSKPIPEFFKSPGF--VKSSHFRMSTSQ 588
            |..|.||..||...|.|:.|:|:||||..|.:|: |.|       .:||..  |:|..:.:||||
Mouse   627 ALFRVAVDKHQALLKAAMSGQGIDRHLFALYIMSRLLH-------MQSPFLTQVQSQQWLLSTSQ 684

  Fly   589 VATK---------YDAFM----GYGPATDDGYACCY-NPRDNDIILAISAWRHCPITDHLKFVKT 639
            |..:         |..::    |:|||.|.||...| ...:|.|...||:.:....||..:..:.
Mouse   685 VPVQQTHLIDVHNYPDYVSSGGGFGPAHDHGYGISYIFMGENAITFHISSKKSSTETDSHRLGQH 749

  Fly   640 LEQSFFEMKNV 650
            :|.:..::.::
Mouse   750 IENALLDVASL 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 181/630 (29%)
Cpt1cNP_001344599.1 CPT_N 1..46 CDD:318644
Carn_acyltransf 171..754 CDD:307070 180/619 (29%)
Coenzyme A binding. /evidence=ECO:0000250 552..564 5/11 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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