DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRAT and Crot

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_076222.1 Gene:Crot / 74114 MGIID:1921364 Length:612 Species:Mus musculus


Alignment Length:606 Identity:193/606 - (31%)
Similarity:306/606 - (50%) Gaps:48/606 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 QPNLLKYHVLPLEETLNRFMTTVEPLLTPEEFQRQKGITSEFLKKQGRELQLLLEETGSKEKNWL 135
            |.:|....|..|||:|.:::.:|:|....:|:::.:.|..:|.:..|:.|...|.|....::|||
Mouse    17 QDSLPSLPVPALEESLKKYLESVKPFANEDEYKKTEEIVQKFQEGAGKRLHQKLLERARGKRNWL 81

  Fly   136 AHRWLKAAYLTYRDPVTV---FVSPGMTFPKQNFRDSR--AFVDYTARVIYGLGEFNDMVHANKI 195
            ...||..|||..|.|..:   ||.|...|  :::..:|  ..::..:.:::....:..::...|:
Mouse    82 EEWWLNVAYLDVRIPSQLNVNFVGPCPHF--EHYWPAREGTQLERGSMMLWHNLNYWQLLRREKL 144

  Fly   196 PIVKMGKNELDNSQFGKVFGTCRIPRRGTDEIV--YNPDSD-----YVVVIYKNHFYQLKIYSKE 253
            |:.|.|...||.:||..:|.||::|....|.|:  :..:|:     ::.|:.:...:...:. .|
Mouse   145 PVHKSGNTPLDMNQFRMLFSTCKVPGITRDSIMNYFKTESEGHCPTHIAVLCRGRAFVFDVL-HE 208

  Fly   254 GKLIAAPCLAAQLENIVLK--ETQVGVPYGILTTDSRDNWAEAYEYLVE-TPGNRDALKTIQGAL 315
            |.||..|.|..||..|..|  ...||.....||::.|..||:|.|||:. .|.|...|:.||.:|
Mouse   209 GCLITPPELLRQLTYIHKKCSNEPVGPSIAALTSEERTRWAKAREYLISLDPENLTLLEKIQTSL 273

  Fly   316 FTVSLDEGTILKEGEETDELILSLIHGSGSKINSGNRWMDKTIQLVVNPNGNVGFTYEHSPAEGQ 380
            |..|:::.:.....||..::...|:.|..|.     ||.||:..|:...||..|...:|:|.:..
Mouse   274 FVYSIEDSSPHATPEEYSQVFEMLLGGDPSV-----RWGDKSYNLISFANGIFGCCCDHAPYDAM 333

  Fly   381 PIAMMMDYVVQKMKEDPS--FGQSGSQDFAPAQKIQFSSSNKSLEKSLNVAQENVD--KLADALQ 441
            .:..:..||.:::.|...  .|....:|....:::.|:...|.|.   :|:|....  |.|..||
Mouse   334 VMVNIAHYVDERVLETEGRWKGSEKVRDIPLPEELVFTVDEKILN---DVSQAKAQHLKAASDLQ 395

  Fly   442 MKVLKFNGFGKDFIKKQRLGPDSFVQMALQLAFYKMHSEPPAQYESAHLRIFDGGRTETIRSCSN 506
            :....|..|||...|::.|.||:|:|:|||||:|::|..|...||:|..|.|..|||||:|||:.
Mouse   396 IAASTFTSFGKKLTKEEALHPDTFIQLALQLAYYRLHGRPGCCYETAMTRYFYHGRTETVRSCTV 460

  Fly   507 ESLAFSRAMQDPNVTDQERAAKLREAVVSHQTYAKLALQGKGVDRHLLGLKLMALEHSKPIPEFF 571
            |::.:.::||||:.:..||..|:.||...|....|....|||.|||||||.|:|.|...|:||.|
Mouse   461 EAVRWCQSMQDPSASLLERQQKMLEAFAKHNKMMKDCSHGKGFDRHLLGLLLIAKEEGLPVPELF 525

  Fly   572 KSPGFVKS---SHFRMSTSQVATKYDAFMGY-------GPATDDGYACCYNPRDNDIILAISAWR 626
            :.|.|.:|   .:|.:|||.|        ||       .|...:||...|:.||:..::|.|:||
Mouse   526 EDPLFSRSGGGGNFVLSTSLV--------GYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSSWR 582

  Fly   627 HCPITDHLKFVKTLEQSFFEM 647
            .||.||..|.|:.:..:|.:|
Mouse   583 SCPETDAEKLVQMIFHAFHDM 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 192/603 (32%)
CrotNP_076222.1 Carn_acyltransf 20..603 CDD:395612 191/601 (32%)
Coenzyme A binding. /evidence=ECO:0000250 410..417 2/6 (33%)
Microbody targeting signal. /evidence=ECO:0000255 610..612
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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