DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRAT and cpt1b

DIOPT Version :10

Sequence 1:NP_649650.2 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001315121.1 Gene:cpt1b / 449677 ZFINID:ZDB-GENE-041010-9 Length:770 Species:Danio rerio


Alignment Length:664 Identity:195/664 - (29%)
Similarity:316/664 - (47%) Gaps:101/664 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SYST-----VQKTIPLEQPNLLKYH-------VLPLEETLNRFMTTVEPLLTPEEFQRQKGITSE 111
            ||||     :.|.:...:|.|..:.       |..:::|:.|::.:|.|||..|::::.:.:.::
Zfish   144 SYSTKVWLSLVKLLSGRRPLLYSFQGSLPHLPVPSIDDTIRRYLESVRPLLDDEQYKQMETVAND 208

  Fly   112 FLKKQGRELQLLLEETGSKEKNWLAHRWLKAAYLTYRDPVTVFVSPGMTFPKQNFRDSRAFVDYT 176
            |.|....:||..|:.......|:::..|.:..||..|||:.|         ..||        ||
Zfish   209 FKKDPAPKLQKHLKLKSWWATNYVSDWWEEYIYLRGRDPIMV---------NSNF--------YT 256

  Fly   177 ARVIYGLGEF------NDMVHA-----NKI------PIVKMGKNELDNSQFGKVFGTCRIPRRGT 224
            ..::|.:..:      .::|||     .|:      |:..:|...:.:.|:.::|.|.|||...|
Zfish   257 MDLLYVIPTYRQAARAGNVVHAMLQYRRKLERGELTPLRALGIVPMCSFQYERMFNTTRIPGIET 321

  Fly   225 DEIVYNPDSDYVVVIYKNHFYQLKIYSKEGKLIAAPCLAAQLENIV--LKETQVG-VPYGILTTD 286
            |.:.:..|..::||.::...:::.:| ..|:.:....|..|.:.|:  ..|.|.| :....||..
Zfish   322 DFVQHLKDRKHLVVYHRGRLFKVWLY-YGGRHLWPSELELQFQRILDDKSEPQPGELKLPSLTAG 385

  Fly   287 SRDNWAEA-YEYLVETPGNRDALKTIQGALFTVSLDEGTILKEGEETDELIL---SLIHGSGSKI 347
            :|..||.| .:|..|.. ||.:|:.|:.|.|.::||:.....:.|....|.|   ||:||     
Zfish   386 NRVPWARARLKYFGEGV-NRASLEAIETAAFFLTLDDEAHGYDPENIRSLDLYAKSLLHG----- 444

  Fly   348 NSGNRWMDKTIQLVVNPNGNVGFTYEHSPAEGQPIAMMMDYVVQKMKEDPSFGQSG------SQD 406
            ...:||.||:..|:|..||.:|...|||.|:...|..|.:||:........:...|      ::.
Zfish   445 KCYDRWFDKSFNLIVYKNGKMGVNTEHSWADSPIIGHMWEYVLATDCFHLGYTAEGHCKGDVNKT 509

  Fly   407 FAPAQKIQF---SSSNKSLEKSLNVAQENVDKLADALQMKVLKFNGFGKDFIKKQRLGPDSFVQM 468
            .||..::|:   .:..:.:|.|..:|:    .:||.:......||.|||..|||.|..||:|:|:
Zfish   510 LAPPTRLQWDIPKACQEIIEGSYRIAK----GIADDVDFHGCLFNEFGKGLIKKCRTSPDAFIQL 570

  Fly   469 ALQLAFYKMHSEPPAQYESAHLRIFDGGRTETIRSCSNESLAFSRAMQDPNVTDQERAAKLREAV 533
            |||||.|:...|....|||:..|:|..|||||:|||:.||.||.|||:|...|:::|.|..::|.
Zfish   571 ALQLAQYRDKGEFCLTYESSMTRMFREGRTETVRSCTCESTAFVRAMEDDTTTNEQRLALFKQAA 635

  Fly   534 VSHQTYAKLALQGKGVDRHLLGL----KLMALEHSKPIPEFFKSPGFVKSSHFRMSTSQV----- 589
            ..||...:||:.|.|:||||..|    |:|.::     ..|.|.   |.|..:|:||||.     
Zfish   636 EKHQNMYRLAMTGAGIDRHLFCLYIVSKVMGID-----SPFLKQ---VLSEPWRLSTSQTPQQQL 692

  Fly   590 ----ATKYDAFM----GYGPATDDGYACCY-NPRDNDIILAISAWRHCPITDHLKFVKTLEQSFF 645
                ..|:..::    |:||..||||...| ...:|.|...||:....|.||..:|.:.:.|:..
Zfish   693 NLIDTQKFPKYVSAGGGFGPVADDGYGVSYIIVGENLITFHISSKFSSPETDSFRFGQNIRQAMQ 757

  Fly   646 EMKNVLEKNPPETK 659
            :::.:.  |..|.|
Zfish   758 DIRALF--NQKEKK 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_649650.2 Carn_acyltransf 79..642 CDD:459926 184/613 (30%)
cpt1bNP_001315121.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 174..754 CDD:459926 184/615 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.