DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRAT and cpt1b

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001315121.1 Gene:cpt1b / 449677 ZFINID:ZDB-GENE-041010-9 Length:770 Species:Danio rerio


Alignment Length:664 Identity:195/664 - (29%)
Similarity:316/664 - (47%) Gaps:101/664 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SYST-----VQKTIPLEQPNLLKYH-------VLPLEETLNRFMTTVEPLLTPEEFQRQKGITSE 111
            ||||     :.|.:...:|.|..:.       |..:::|:.|::.:|.|||..|::::.:.:.::
Zfish   144 SYSTKVWLSLVKLLSGRRPLLYSFQGSLPHLPVPSIDDTIRRYLESVRPLLDDEQYKQMETVAND 208

  Fly   112 FLKKQGRELQLLLEETGSKEKNWLAHRWLKAAYLTYRDPVTVFVSPGMTFPKQNFRDSRAFVDYT 176
            |.|....:||..|:.......|:::..|.:..||..|||:.|         ..||        ||
Zfish   209 FKKDPAPKLQKHLKLKSWWATNYVSDWWEEYIYLRGRDPIMV---------NSNF--------YT 256

  Fly   177 ARVIYGLGEF------NDMVHA-----NKI------PIVKMGKNELDNSQFGKVFGTCRIPRRGT 224
            ..::|.:..:      .::|||     .|:      |:..:|...:.:.|:.::|.|.|||...|
Zfish   257 MDLLYVIPTYRQAARAGNVVHAMLQYRRKLERGELTPLRALGIVPMCSFQYERMFNTTRIPGIET 321

  Fly   225 DEIVYNPDSDYVVVIYKNHFYQLKIYSKEGKLIAAPCLAAQLENIV--LKETQVG-VPYGILTTD 286
            |.:.:..|..::||.::...:::.:| ..|:.:....|..|.:.|:  ..|.|.| :....||..
Zfish   322 DFVQHLKDRKHLVVYHRGRLFKVWLY-YGGRHLWPSELELQFQRILDDKSEPQPGELKLPSLTAG 385

  Fly   287 SRDNWAEA-YEYLVETPGNRDALKTIQGALFTVSLDEGTILKEGEETDELIL---SLIHGSGSKI 347
            :|..||.| .:|..|.. ||.:|:.|:.|.|.::||:.....:.|....|.|   ||:||     
Zfish   386 NRVPWARARLKYFGEGV-NRASLEAIETAAFFLTLDDEAHGYDPENIRSLDLYAKSLLHG----- 444

  Fly   348 NSGNRWMDKTIQLVVNPNGNVGFTYEHSPAEGQPIAMMMDYVVQKMKEDPSFGQSG------SQD 406
            ...:||.||:..|:|..||.:|...|||.|:...|..|.:||:........:...|      ::.
Zfish   445 KCYDRWFDKSFNLIVYKNGKMGVNTEHSWADSPIIGHMWEYVLATDCFHLGYTAEGHCKGDVNKT 509

  Fly   407 FAPAQKIQF---SSSNKSLEKSLNVAQENVDKLADALQMKVLKFNGFGKDFIKKQRLGPDSFVQM 468
            .||..::|:   .:..:.:|.|..:|:    .:||.:......||.|||..|||.|..||:|:|:
Zfish   510 LAPPTRLQWDIPKACQEIIEGSYRIAK----GIADDVDFHGCLFNEFGKGLIKKCRTSPDAFIQL 570

  Fly   469 ALQLAFYKMHSEPPAQYESAHLRIFDGGRTETIRSCSNESLAFSRAMQDPNVTDQERAAKLREAV 533
            |||||.|:...|....|||:..|:|..|||||:|||:.||.||.|||:|...|:::|.|..::|.
Zfish   571 ALQLAQYRDKGEFCLTYESSMTRMFREGRTETVRSCTCESTAFVRAMEDDTTTNEQRLALFKQAA 635

  Fly   534 VSHQTYAKLALQGKGVDRHLLGL----KLMALEHSKPIPEFFKSPGFVKSSHFRMSTSQV----- 589
            ..||...:||:.|.|:||||..|    |:|.::     ..|.|.   |.|..:|:||||.     
Zfish   636 EKHQNMYRLAMTGAGIDRHLFCLYIVSKVMGID-----SPFLKQ---VLSEPWRLSTSQTPQQQL 692

  Fly   590 ----ATKYDAFM----GYGPATDDGYACCY-NPRDNDIILAISAWRHCPITDHLKFVKTLEQSFF 645
                ..|:..::    |:||..||||...| ...:|.|...||:....|.||..:|.:.:.|:..
Zfish   693 NLIDTQKFPKYVSAGGGFGPVADDGYGVSYIIVGENLITFHISSKFSSPETDSFRFGQNIRQAMQ 757

  Fly   646 EMKNVLEKNPPETK 659
            :::.:.  |..|.|
Zfish   758 DIRALF--NQKEKK 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 186/631 (29%)
cpt1bNP_001315121.1 CPT_N 1..46 CDD:293093
Carn_acyltransf 171..760 CDD:279140 185/624 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.