DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRAT and crat

DIOPT Version :10

Sequence 1:NP_649650.2 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_017951675.2 Gene:crat / 394811 XenbaseID:XB-GENE-487012 Length:667 Species:Xenopus tropicalis


Alignment Length:596 Identity:187/596 - (31%)
Similarity:317/596 - (53%) Gaps:33/596 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 LEETLNRFMTTVEPLLTPEEFQRQKGITSEFLKK--QGRELQLLLEETGSKEKNWLAHRWLKAAY 144
            |.:||.|::.:::||::.:|.:..:.:..|||:.  ||.||...|::...:..|||.....:|.|
 Frog    81 LSKTLFRYLGSLQPLVSKDELESTRELVEEFLRPGGQGEELAKQLQKRAERTDNWLTDWRHQAIY 145

  Fly   145 LTYRDPVTVFVSPGMTFPKQNFRDSRAFVDYTARVIYGLGEFNDMVHA-NKIPIVKMGKNELDNS 208
            |....|:.|..||.:..|:::.:|.|..:.:.:::|.|:.:|...:.: :.:..:..|: .|...
 Frog   146 LENHLPLPVHSSPAVLLPQRDHKDWRGQLRFASKLISGVLDFKAKIESPDGLTEIWRGR-PLCPH 209

  Fly   209 QFGKVFGTCRIPRRGTDEIVYNPD----SDYVVVIYKNHFYQLKIYSKEGKLIAAPCLAAQLENI 269
            |:...||:||.|....|.::..|.    |.||.|.....|:|:.:|:.:|    :|....|:...
 Frog   210 QYHDFFGSCREPGYKRDRVLLQPAHKSLSQYVTVCRNYQFFQMDVYNSDG----SPLTEDQIHQQ 270

  Fly   270 VL----------KETQVGVPYGILTTDSRDNWAEAYEYLVETPGNRDALKTIQGALFTVSLDEGT 324
            :|          ||     |.|:||||.|::|..||..|:....||:::::||.:||||.|| .|
 Frog   271 MLFLRAHSYKTDKE-----PVGVLTTDHRNSWGRAYTTLIRDRLNRESVRSIQRSLFTVCLD-AT 329

  Fly   325 ILKEGEE--TDELILSLIHGSGSKINSGNRWMDKTIQLVVNPNGNVGFTYEHSPAEGQPIAMMMD 387
            .||..||  :......::||.|:..||||||.|||:|.||..:|..|..|:.:.|:...|..|:.
 Frog   330 ALKYSEELYSSRTAAQMLHGGGTHANSGNRWFDKTLQFVVGEDGTCGLIYDQATADASAILTMLG 394

  Fly   388 YVVQKMKEDPSF--GQSGSQDFAPAQKIQFSSSNKSLEKSLNVAQENVDKLADALQMKVLKFNGF 450
            :|::.....|..  .::......|.:|:.|:...:: ::.:..|::|:|.|.:.|.:....|:.|
 Frog   395 HVLEYCSRGPKRLPPRTPLTRLPPPKKLYFNFPPET-KQHIENAKQNLDILVNDLDICCFTFSDF 458

  Fly   451 GKDFIKKQRLGPDSFVQMALQLAFYKMHSEPPAQYESAHLRIFDGGRTETIRSCSNESLAFSRAM 515
            ||.|.||..:.|.:|:|:|||||:|:.|....|..|...||.|..||::.:|..|:|:|.|.:|.
 Frog   459 GKSFPKKHNMRPGAFLQVALQLAYYRCHESLCATCEVVSLRTFHRGRSDVVRCSSSEALEFVQAA 523

  Fly   516 QDPNVTDQERAAKLREAVVSHQTYAKLALQGKGVDRHLLGLKLMALEHSKPIPEFFKSPGFVKSS 580
            .:||....|:.:.|::||.|||...:..|||:.||..||.||::.:.....:|.......:..||
 Frog   524 DEPNRLAGEKLSLLKKAVESHQCATEQVLQGQSVDGTLLALKMLCISSGAALPAILMDTSYAVSS 588

  Fly   581 HFRMSTSQVATKYDAFMGYGPATDDGYACCYNPRDNDIILAISAWRHCPITDHLKFVKTLEQSFF 645
            |:::.|.||::..|..|.|||...|||:.|:.|..:.|.:.:||:..|..||..|...:|:.:..
 Frog   589 HWKLFTGQVSSPIDCVMCYGPLVPDGYSVCFAPSLDSITVCVSAFDCCQETDAQKLSDSLQGALR 653

  Fly   646 EMKNVLEKNPP 656
            :|::::.|..|
 Frog   654 DMQSLIIKCQP 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_649650.2 Carn_acyltransf 79..642 CDD:459926 184/580 (32%)
cratXP_017951675.2 Carn_acyltransf 76..649 CDD:459926 183/579 (32%)

Return to query results.
Submit another query.