DRSC/TRiP Functional Genomics Resources

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Protein Alignment CRAT and CPT2

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster


Alignment Length:693 Identity:174/693 - (25%)
Similarity:318/693 - (45%) Gaps:91/693 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RGNGKLLWNLTKNSLAQQSPNGIAKKVLPASSYSTV--QKTIPLEQPNLLKYHVLP---LEETLN 87
            |.:..|.| ::.||....:.:|...:.|..|...|:  |:::|.          ||   ||.:..
  Fly     5 RVHRNLSW-ISTNSSRTTTTHGQHYQYLQCSKLPTLYFQRSLPR----------LPIPLLENSCR 58

  Fly    88 RFMTTVEPLLTPEEFQRQKGITSEFLKKQGRELQLLLE--ETGSKEKNWLAHRWLKAAYLTYRDP 150
            ||:...:|||:|.|..:.:....:|.:..|.||...|:  :..:|..::::..|.. .||..|.|
  Fly    59 RFLEATKPLLSPAEQAQTQQTVEQFRQGIGMELHAKLKSHDAENKHTSYISQPWFD-MYLADRAP 122

  Fly   151 VTVFVSPGMTFPKQNFRD--SRAFVDYTARVIYGLGEFNDM-----------VHANKIPI----- 197
            :.:..:| :...|.:.|.  .:..|..|..:|..|..:..:           ::|.|...     
  Fly   123 LPLNYNP-LLVMKSDARPEYQQQVVRATNLIISSLRFWRSLQADLLEPEVYHMNAKKSDTSSYRR 186

  Fly   198 -VKMGKN-------------ELDNSQFGKVFGTCRIPRRGTDEIVYNPDSDYVVVIYKNHFYQLK 248
             :|:...             .||.||:.::|||.||||.|.||:|.:||:.:::|:.:.|.|.:.
  Fly   187 WMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTSRIPRIGKDELVQSPDAKHILVMRRGHMYAVN 251

  Fly   249 IYSKEGKLIAAPCLAAQLENIVLKETQ---VGVPYGILTTDSRDNWAEAYEYLVETPGNRDAL-K 309
            :....|.:.:...:..:|..::..:..   ..||.|:||:..||.||:..::.|....|.|.| :
  Fly   252 VLDSSGYIESPSVILGRLRAVLKLDADREAASVPLGVLTSGQRDEWAKTRQHFVSNTKNADLLER 316

  Fly   310 TIQGALFTVSLD--EGTILKEGEETDELILSLIHGSGSKINSGNRWMDKTIQLVVNPNGNVGFTY 372
            .:..|||.|.||  |..:..|.:: :.|:..|:.|...     |||.||:|.|:::.:|.....:
  Fly   317 EVDAALFCVCLDGEEDGVFNENQQ-EPLLKHLLAGKAQ-----NRWFDKSISLLISADGTTAINF 375

  Fly   373 EHSPAEGQPI----------AMMMDYVVQKMKEDPSFGQSGSQDFAPAQKIQFSSSNKSLEKSLN 427
            |||..:|..:          .:...:|..:....|:.|     ||:..:.|.|...: :.:.:::
  Fly   376 EHSWGDGVAVLRYFNELYKDTLKQPFVSTETVHTPAEG-----DFSNVRPINFEIDD-ATKSAVS 434

  Fly   428 VAQENVDKLADALQMKVLKFNGFGKDFIKKQRLGPDSFVQMALQLAFYKMHSEPPAQYESAHLRI 492
            .|......:.|.|.|.|||:....|...|:..|.|||.:|::.|||:.:.:|.....|||.....
  Fly   435 EAYNKNASIVDNLDMNVLKYPHINKPTCKQYGLSPDSIIQLSFQLAYRQAYSGYVGSYESCSTSA 499

  Fly   493 FDGGRTETIRSCSNESLAFSRAMQDPNVTDQERAAKLREAVVS----HQTYAKLALQGKGVDRHL 553
            |..|||||:|.|:|.:..|..|:..|. ..:..|.:||..:.:    |....|.|..|:|.||||
  Fly   500 FRHGRTETMRPCTNATRDFCEAILQPE-RSKPSAGELRAMIDNCSKVHGQLTKEAAMGQGFDRHL 563

  Fly   554 LGLKLMALEHSKPIPEFFKSPGFVKSSHFRMSTSQVATKYDAFM--GYGPATDDGYACCYNPRDN 616
            ..|:..|.:...|||:.:::..:.:.::..:|||.:.:  ||.:  .:||...:|:...|:.:::
  Fly   564 FALRHTAQKEGIPIPDLYETEAYKRINNNIISTSTLGS--DALLAGSFGPVVKNGFGIGYSIQND 626

  Fly   617 DIILAISAWRHCPITDHLKFVKTLEQSFFEMKNVLEKNPPETK 659
            .....::.:::  ..|...|:.:||.:|.::..|::::....|
  Fly   627 FAGAIVTTYKN--QADGKVFIDSLESAFDKICAVIQQSSSSKK 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 161/632 (25%)
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 162/638 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469046
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22589
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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