DRSC/TRiP Functional Genomics Resources

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Protein Alignment CRAT and whd

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster


Alignment Length:651 Identity:207/651 - (31%)
Similarity:324/651 - (49%) Gaps:64/651 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LPASSYSTVQKTI-PLEQPNLLKYH----VLPL---EETLNRFMTTVEPLLTPEEFQRQKGITSE 111
            ||...:..|.:.: ...:|.|..:.    .|||   ::|:.|::.:|.|||..|.:.|.:.:..|
  Fly   144 LPTMLWVAVVRVLSSWNKPGLYSFQGSLPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKE 208

  Fly   112 FLKKQGRELQ--LLLEETGSKEKNWLAHRWLKAAYLTYRDPVTV---FVSPGMTFPKQNFRDSRA 171
            |.:..|::||  |:|:...|  .|:::..|.:..||..|.|:.|   |......|  .|..|.:|
  Fly   209 FEQTIGKKLQWYLILKSWWS--TNYVSDWWEEYVYLRGRSPLCVNSNFYGTDAIF--MNLTDKQA 269

  Fly   172 FVDYTARVIYGLGEFNDMV-HANKIPIVKMGKNELDNSQFGKVFGTCRIPRRGTDEIVYNPDSDY 235
              ...|.||..|..|..:: |....||:..|...|.:.|:.:.|.|.|:|...||.|::..||::
  Fly   270 --ARAANVISLLLNFRRLIEHQELQPIMVQGMIPLCSWQYERTFNTARVPGLETDRIIHYRDSNH 332

  Fly   236 VVVIYKNHFYQLKIYSKEGKLIAAPC-LAAQLENIVL-KETQV-GVPY-GILTTDSRDNWAEAYE 296
            :||::|..:|::.||.| |::: .|| |..|:|.|:. |.|.| |..: ..||..:|..||||..
  Fly   333 IVVLHKGCYYKMLIYYK-GRIL-RPCELQVQIEEILKGKATPVEGEEHLAALTAWNRSKWAEARN 395

  Fly   297 YLVETPGNRDALKTIQGALFTVSLDEGTI---LKEGEETDELILSLIHGSGSKINSGNRWMDKTI 358
            .......|:.:|:||:.|.|.:|||:...   |...|..|.....|:||:|.     |||.||..
  Fly   396 TFFSWGVNQTSLRTIESAAFVLSLDDEPFEFDLARPELLDNFGKKLLHGNGY-----NRWFDKCF 455

  Fly   359 QLVVNPNGNVGFTYEHSPAEGQPIAMMMD-YVVQKMKE---DPSFGQSGSQDFAPAQKIQFSSSN 419
            .:.|..||.|||..||:.::....:.|.: .:|..:..   |.:....|:..|.|....:.:...
  Fly   456 TVCVGTNGRVGFNAEHTWSDAAIASHMWENLIVDDLVSDGYDETGNTKGTPAFQPPTPTRLTWDL 520

  Fly   420 KSLEKSLNVAQENVDKLADALQMKVLKFNGFGKDFIKKQRLGPDSFVQMALQLAFYKMHSEPPAQ 484
            |.....:..|..:|.||.:.:.:::|....:||.|:||.|:.||:::|||||||:|:........
  Fly   521 KPCLAQIEEATIDVTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDAGRFSLT 585

  Fly   485 YESAHLRIFDGGRTETIRSCSNESLAFSRAMQDPNVTDQERAAKLREAVVSHQTYAKLALQGKGV 549
            ||::..|:|..|||||:|.|:.||.|:.:|||:||.|:.||...::.|...||...:.|:.|:|:
  Fly   586 YEASMTRLFREGRTETVRPCTIESSAWVKAMQNPNTTNDERVKMMQAACDRHQLGYQDAMCGRGI 650

  Fly   550 DRHLLGLKLMA--LEHSKPIPEFFKSPGFVKSSHFRMSTSQV----ATKYD---------AFMGY 599
            ||||..|.:::  ||...|   |...   |.|..:|:||||.    ..|.|         |..|:
  Fly   651 DRHLFCLYVVSKYLEVDSP---FLNE---VLSEPWRLSTSQTPHGQTPKMDLKKHPNCISAGGGF 709

  Fly   600 GPATDDGYACCY-NPRDNDIILAISAWRHCPITDHLKFVKTLEQSFFEMKNVLEK----NPPETK 659
            ||..||||...| ...:|.|...|||...|..||..:|.:.:.|:..:::::.|:    :|...|
  Fly   710 GPVADDGYGVSYIIAGENLIFFHISAKTTCQQTDVHRFAQNISQALSDIRSMFEQHMKDHPKPAK 774

  Fly   660 S 660
            |
  Fly   775 S 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 199/613 (32%)
whdNP_001163111.1 CPT_N 1..45 CDD:293093
Carn_acyltransf 171..759 CDD:279140 198/606 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448726
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D35481at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46717
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22589
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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