DRSC/TRiP Functional Genomics Resources

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Protein Alignment CRAT and whd

DIOPT Version :10

Sequence 1:NP_649650.2 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001163111.1 Gene:whd / 36109 FlyBaseID:FBgn0261862 Length:782 Species:Drosophila melanogaster


Alignment Length:651 Identity:207/651 - (31%)
Similarity:324/651 - (49%) Gaps:64/651 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LPASSYSTVQKTI-PLEQPNLLKYH----VLPL---EETLNRFMTTVEPLLTPEEFQRQKGITSE 111
            ||...:..|.:.: ...:|.|..:.    .|||   ::|:.|::.:|.|||..|.:.|.:.:..|
  Fly   144 LPTMLWVAVVRVLSSWNKPGLYSFQGSLPRLPLPSVKDTMTRYLRSVRPLLDDENYTRMERLAKE 208

  Fly   112 FLKKQGRELQ--LLLEETGSKEKNWLAHRWLKAAYLTYRDPVTV---FVSPGMTFPKQNFRDSRA 171
            |.:..|::||  |:|:...|  .|:::..|.:..||..|.|:.|   |......|  .|..|.:|
  Fly   209 FEQTIGKKLQWYLILKSWWS--TNYVSDWWEEYVYLRGRSPLCVNSNFYGTDAIF--MNLTDKQA 269

  Fly   172 FVDYTARVIYGLGEFNDMV-HANKIPIVKMGKNELDNSQFGKVFGTCRIPRRGTDEIVYNPDSDY 235
              ...|.||..|..|..:: |....||:..|...|.:.|:.:.|.|.|:|...||.|::..||::
  Fly   270 --ARAANVISLLLNFRRLIEHQELQPIMVQGMIPLCSWQYERTFNTARVPGLETDRIIHYRDSNH 332

  Fly   236 VVVIYKNHFYQLKIYSKEGKLIAAPC-LAAQLENIVL-KETQV-GVPY-GILTTDSRDNWAEAYE 296
            :||::|..:|::.||.| |::: .|| |..|:|.|:. |.|.| |..: ..||..:|..||||..
  Fly   333 IVVLHKGCYYKMLIYYK-GRIL-RPCELQVQIEEILKGKATPVEGEEHLAALTAWNRSKWAEARN 395

  Fly   297 YLVETPGNRDALKTIQGALFTVSLDEGTI---LKEGEETDELILSLIHGSGSKINSGNRWMDKTI 358
            .......|:.:|:||:.|.|.:|||:...   |...|..|.....|:||:|.     |||.||..
  Fly   396 TFFSWGVNQTSLRTIESAAFVLSLDDEPFEFDLARPELLDNFGKKLLHGNGY-----NRWFDKCF 455

  Fly   359 QLVVNPNGNVGFTYEHSPAEGQPIAMMMD-YVVQKMKE---DPSFGQSGSQDFAPAQKIQFSSSN 419
            .:.|..||.|||..||:.::....:.|.: .:|..:..   |.:....|:..|.|....:.:...
  Fly   456 TVCVGTNGRVGFNAEHTWSDAAIASHMWENLIVDDLVSDGYDETGNTKGTPAFQPPTPTRLTWDL 520

  Fly   420 KSLEKSLNVAQENVDKLADALQMKVLKFNGFGKDFIKKQRLGPDSFVQMALQLAFYKMHSEPPAQ 484
            |.....:..|..:|.||.:.:.:::|....:||.|:||.|:.||:::|||||||:|:........
  Fly   521 KPCLAQIEEATIDVTKLINEVNLRILVHQDYGKGFMKKCRISPDAYIQMALQLAYYRDAGRFSLT 585

  Fly   485 YESAHLRIFDGGRTETIRSCSNESLAFSRAMQDPNVTDQERAAKLREAVVSHQTYAKLALQGKGV 549
            ||::..|:|..|||||:|.|:.||.|:.:|||:||.|:.||...::.|...||...:.|:.|:|:
  Fly   586 YEASMTRLFREGRTETVRPCTIESSAWVKAMQNPNTTNDERVKMMQAACDRHQLGYQDAMCGRGI 650

  Fly   550 DRHLLGLKLMA--LEHSKPIPEFFKSPGFVKSSHFRMSTSQV----ATKYD---------AFMGY 599
            ||||..|.:::  ||...|   |...   |.|..:|:||||.    ..|.|         |..|:
  Fly   651 DRHLFCLYVVSKYLEVDSP---FLNE---VLSEPWRLSTSQTPHGQTPKMDLKKHPNCISAGGGF 709

  Fly   600 GPATDDGYACCY-NPRDNDIILAISAWRHCPITDHLKFVKTLEQSFFEMKNVLEK----NPPETK 659
            ||..||||...| ...:|.|...|||...|..||..:|.:.:.|:..:::::.|:    :|...|
  Fly   710 GPVADDGYGVSYIIAGENLIFFHISAKTTCQQTDVHRFAQNISQALSDIRSMFEQHMKDHPKPAK 774

  Fly   660 S 660
            |
  Fly   775 S 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_649650.2 Carn_acyltransf 79..642 CDD:459926 197/598 (33%)
whdNP_001163111.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 174..753 CDD:459926 197/597 (33%)
Blue background indicates that the domain is not in the aligned region.

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