DRSC/TRiP Functional Genomics Resources

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Protein Alignment CRAT and Cpt1c

DIOPT Version :10

Sequence 1:NP_649650.2 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_006229128.1 Gene:Cpt1c / 308579 RGDID:1305384 Length:802 Species:Rattus norvegicus


Alignment Length:664 Identity:184/664 - (27%)
Similarity:305/664 - (45%) Gaps:97/664 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PNGIAKKVLPASSYSTVQKTIPLEQPNLLKY-HVLP------LEETLNRFMTTVEPLLTPEEFQR 104
            |:|....  |..::..:.:......|.|..: ..||      .:||:.:::.::.|:|..:.|..
  Rat   139 PHGTMSS--PTKTWLALVRIFSGRHPRLFSFQRALPRQPVPGAQETVRKYLESMRPVLRDDAFDS 201

  Fly   105 QKGITSEFLKKQGRELQLLLEETGSKEKNWLAHRWLKAAYLTYRDPVT----------VFVSPGM 159
            ...:.::||:.|...|||.|:.......|:::..|.:..||..|..:.          ::|:|  
  Rat   202 VVALANDFLRLQAPRLQLYLQLKSWCASNYVSDWWEEFVYLRSRGSLVNSTYYMMQDFLYVTP-- 264

  Fly   160 TFPKQNFRDSRAFVDYTARVIYGLGEFNDMVHANKI-PIVKMGKNELDNSQFGKVFGTCRIPRRG 223
             .|.|..|...|        ::.|..:..:::..:| |.:.||...|.::|:.::|.|.|||...
  Rat   265 -TPLQAARAGNA--------VHTLLLYRHLLNRQEIPPTLLMGMRPLCSAQYERMFNTTRIPGVE 320

  Fly   224 TDEIVYNPDSDYVVVIYKNHFYQLKIYSKEGKLIAAPCLAAQLENIVLKETQVGVP----YGILT 284
            .|.:.:..||.:|.|.::..|:::..:|..|.|  :|....|....:|.:.....|    ...||
  Rat   321 KDYLCHLQDSQHVAVFHQGRFFRVGTHSSNGLL--SPRALEQQFQYILDDPSPACPLEEHLAALT 383

  Fly   285 TDSRDNWAEAYEYLVETPGNRDALKTIQGALFTVSLDE--GTILKE--GEETDELILSLIHGSGS 345
            ...|..||:..| .|:|.. ..||:|::||.|.||||.  ..:.:|  ....|....:|:.|.|.
  Rat   384 AAPRSMWAQVRE-SVKTHA-ATALETVEGAAFFVSLDSEPAGLTRENPAASLDTYAHTLLTGQGH 446

  Fly   346 KINSGNRWMDKTIQLVVNPNGNVGFTYEHSPAEGQPIA------------MMMDYVVQ---KMKE 395
                 :||.||:..|:|..||.:|.:.|||.|: .|:|            ..:.|...   |...
  Rat   447 -----DRWFDKSFTLIVFSNGKLGLSVEHSWAD-CPVAGHLWEFTLATECFQLGYATDGHCKGHP 505

  Fly   396 DPSFGQSGSQDFAPAQKIQFSSSNKSLEKSLNVAQENVDKLADALQMKVLKFNGFGKDFIKKQRL 460
            ||:..:        .|::|:... |.::.|:::|......|:..:...|..|..|||.|||...:
  Rat   506 DPALPK--------PQRLQWDLP-KQIQPSISLALRGAKTLSGNIDCHVFPFFHFGKSFIKGCHV 561

  Fly   461 GPDSFVQMALQLAFYKMHSEPPAQYESAHLRIFDGGRTETIRSCSNESLAFSRAMQDPNVTDQER 525
            ..|||:|:.||||.::...:....||||..|:|..|||||:|||:.|:..|.|||::...|||:.
  Rat   562 SSDSFIQLVLQLAHFRDRGQFCLTYESAMTRLFLEGRTETVRSCTREACQFVRAMENKERTDQQC 626

  Fly   526 AAKLREAVVSHQTYAKLALQGKGVDRHLLGLKLMA-LEHSKPIPEFFKSPGF--VKSSHFRMSTS 587
            .|..||||..||...|.|:.|:|:||||..|.:|: |.|       .:||..  |:|..:.:|||
  Rat   627 LALFREAVDKHQALLKAAMSGQGIDRHLFALYIMSRLLH-------MQSPFLTQVQSQQWLLSTS 684

  Fly   588 QVATK---------YDAFM----GYGPATDDGYACCY-NPRDNDIILAISAWRHCPITDHLKFVK 638
            |:..:         |..::    |:|||.|.||...| ...:|.|...||:.:....||..:..:
  Rat   685 QIPVQQTHLFDVHNYPDYVSSGGGFGPAHDHGYGVSYIFMGENAISFHISSKQSSTETDSHRLGQ 749

  Fly   639 TLEQSFFEMKNVLE 652
            .:|.:..::.::.:
  Rat   750 HIEDALLDVASLFQ 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_649650.2 Carn_acyltransf 79..642 CDD:459926 178/619 (29%)
Cpt1cXP_006229128.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 174..753 CDD:459926 176/615 (29%)
Blue background indicates that the domain is not in the aligned region.

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