DRSC/TRiP Functional Genomics Resources

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Protein Alignment CRAT and Chat

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001164064.1 Gene:Chat / 290567 RGDID:1304627 Length:644 Species:Rattus norvegicus


Alignment Length:652 Identity:200/652 - (30%)
Similarity:330/652 - (50%) Gaps:56/652 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LAQQSPNGIAKKVLPASSYSTVQKTIPLEQPNLLKYHVLPLEETLNRFMTTVEPLLTPEEFQRQK 106
            :.:::|.   |..:.|||:         |:.:|.|..|.||::||..::..::.|:..|:|::.:
  Rat     3 ILEKAPQ---KMPVKASSW---------EELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQ 55

  Fly   107 GITSEFLKK--QGRELQLLLEETGSKEKNWLAHRWLKAAYLTYRDPVTVFVSPGMTFPKQNFRDS 169
            .|...|...  .|..||..|.|...|..||::..||...||..|..:.|..||.:.|.:|:|:|:
  Rat    56 AIVKRFGAPGGLGETLQEKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDT 120

  Fly   170 RAFVDYTARVIYGLGEFNDMVHANKIPIVKMGKNELDN-----SQFGKVFGTCRIPRRGTDEIVY 229
            ...:.:.|.:|.|:..:..::.::.:| ....|.:|..     .|:.::|.:.|:|....|.:|.
  Rat   121 NDQLRFAACLISGVLSYKTLLDSHSLP-TDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVA 184

  Fly   230 N-----PDSDYVVVIYKNHFYQLKIY-----SKEGKLIAAPCLAAQLENIV---LKETQVGVPYG 281
            .     |:.::|:|...|.|:.|.:.     ..||.|.      .||..||   ..|.:...|.|
  Rat   185 QKSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLF------TQLRKIVKMASNEDERLPPIG 243

  Fly   282 ILTTDSRDNWAEAYEYLVETPGNRDALKTIQGALFTVSLD-EGTILKEGEETD-ELILSLIHGSG 344
            :||:|.|..||:|...|::...|||:|..|:..:..|.|| .||    ||.:| ...|.|:||.|
  Rat   244 LLTSDGRSEWAKARTVLLKDSTNRDSLDMIERCICLVCLDGPGT----GELSDTHRALQLLHGGG 304

  Fly   345 SKINSGNRWMDKTIQLVVNPNGNVGFTYEHSPAEGQPIAMMMDYVVQ-KMKEDPSFGQSGSQDFA 408
            ..:|..|||.||::|.||..:|..|...||||.:|..:....::::: .|..:....::.|....
  Rat   305 CSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSVSEL 369

  Fly   409 PA-QKIQFSSSNKSLEKSLNVAQENVDKLADALQMKVLKFNGFGKDFIKKQRLGPDSFVQMALQL 472
            || :::::..|.:: :..|..:.|.:.::...|...|.||:.:||.|||||:..||.|:|:||||
  Rat   370 PAPRRLRWKCSPET-QGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQL 433

  Fly   473 AFYKMHSEPPAQYESAHLRIFDGGRTETIRSCSNESLAFSRAMQDPN--VTDQERAAKLREAVVS 535
            |:|:::......||||.:|.|..||.:.|||.:.|:|||.:||.|..  :...|:...|:.|:.:
  Rat   434 AYYRLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAMPASEKLQLLQTAMQA 498

  Fly   536 HQTYAKLALQGKGVDRHLLGLKLMALEHSKPIPEFFKSPGFVKSSHFRMSTSQVATKYDAFMGYG 600
            ...|..:|:.|..:|.|||.|:.:|.:..|..||.|....::.|:.|.:|||||.|..:.|..||
  Rat   499 QTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCYG 563

  Fly   601 PATDDGYACCYNPRDNDIILAISAWRHCPITDHLKFVKTLEQSFFEMKNV------LEKNPPETK 659
            |...:||..||||:...|...||::..|..|..::|.:.:..|..:|:::      .:..||..|
  Rat   564 PVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCSSRQPADSKPPAPK 628

  Fly   660 SK 661
            .|
  Rat   629 EK 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 189/599 (32%)
ChatNP_001164064.1 Carn_acyltransf 23..611 CDD:395612 189/599 (32%)
Coenzyme A binding. /evidence=ECO:0000305 412..424 7/11 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 1 1.000 - - FOG0001049
OrthoInspector 1 1.000 - - mtm9104
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X630
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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