DRSC/TRiP Functional Genomics Resources

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Protein Alignment CRAT and Cpt1a

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_113747.2 Gene:Cpt1a / 25757 RGDID:2396 Length:773 Species:Rattus norvegicus


Alignment Length:623 Identity:176/623 - (28%)
Similarity:297/623 - (47%) Gaps:75/623 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 QPNLLKYHVLPLEETLNRFMTTVEPLLTPEEFQRQKGITSEFLKKQGRELQLLLEETGSKEKNWL 135
            |.:|.:..|..:::|::|::.:|.||:..|:|||...:..:|....|.:||..|:.......|::
  Rat   168 QTSLPRLPVPAVKDTVSRYLESVRPLMKEEDFQRMTALAQDFAVNLGPKLQWYLKLKSWWATNYV 232

  Fly   136 AHRWLKAAYLTYRDPVTV----------FVSPGMTFPKQNFRDSRAFVDYTARVIYGLGEFNDMV 190
            :..|.:..||..|.|:.|          :::|      .:.:.:||     ...|:.:..:...:
  Rat   233 SDWWEEYIYLRGRGPLMVNSNYYAMEMLYITP------THIQAARA-----GNTIHAILLYRRTL 286

  Fly   191 HANKI-PIVKMGKN-ELDNSQFGKVFGTCRIPRRGTDEIVYNPDSDYVVVIYKNHFYQLKIYSKE 253
            ...:: ||..:|.. .|.::|:.::|.|.|||...||.|.:..||.::||.::..::::.:| .:
  Rat   287 DREELKPIRLLGSTIPLCSAQWERLFNTSRIPGEETDTIQHIKDSRHIVVYHRGRYFKVWLY-HD 350

  Fly   254 GKLIAAPCLAAQLENIV--LKETQVG-VPYGILTTDSRDNWAEAYEYLVETPGNRDALKTIQGAL 315
            |:|:....|..|::.|:  ..|.|.| .....||...|..||:..:.......|:.:|..::.|.
  Rat   351 GRLLRPRELEQQMQQILDDPSEPQPGEAKLAALTAADRVPWAKCRQTYFARGKNKQSLDAVEKAA 415

  Fly   316 FTVSLDEGTILKEG--EETDELIL-----SLIHGSGSKINSGNRWMDKTIQLVVNPNGNVGFTYE 373
            |.|:|||.   ::|  ||..|..:     ||:||     ...:||.||:|..||..|..:|...|
  Rat   416 FFVTLDES---EQGYREEDPEASIDSYAKSLLHG-----RCFDRWFDKSITFVVFKNSKIGINAE 472

  Fly   374 HSPAEGQPIAMMMDYVVQKMKEDPSFGQSG------SQDFAPAQKIQFSSSNKSLEKSLNVAQEN 432
            ||.|:...:..:.:||:........:.:.|      :.:.....::|:....: .::.::.:..:
  Rat   473 HSWADAPVVGHLWEYVMATDVFQLGYSEDGHCKGDTNPNIPKPTRLQWDIPGE-CQEVIDASLSS 536

  Fly   433 VDKLADALQMKVLKFNGFGKDFIKKQRLGPDSFVQMALQLAFYKMHSEPPAQYESAHLRIFDGGR 497
            ...||:.:.:....|:.|||..|||.|..||:|:|:|||||.||...:....||::..|:|..||
  Rat   537 ASLLANDVDLHSFPFDSFGKGLIKKCRTSPDAFIQLALQLAHYKDMGKFCLTYEASMTRLFREGR 601

  Fly   498 TETIRSCSNESLAFSRAMQDPNVTDQERAAKLREAVVSHQTYAKLALQGKGVDRHLLGL----KL 558
            |||:|||:.||..|.:||.||..|.::|....:.|...||...:||:.|.|:||||..|    |.
  Rat   602 TETVRSCTMESCNFVQAMMDPKSTAEQRLKLFKIACEKHQHLYRLAMTGAGIDRHLFCLYVVSKY 666

  Fly   559 MALEHSKPIPEFFKSPGFVKSSHFRMSTSQVATKYDAFM-------------GYGPATDDGYACC 610
            :|::     ..|.|.   |.|..:|:||||...:.....             |:||..||||...
  Rat   667 LAVD-----SPFLKE---VLSEPWRLSTSQTPQQQVELFDFEKNPDYVSCGGGFGPVADDGYGVS 723

  Fly   611 Y-NPRDNDIILAISAWRHCPITDHLKFVKTLEQSFFEM 647
            | ...:|.|...||:....|.||..:|.|.|.|:..::
  Rat   724 YIIVGENFIHFHISSKFSSPETDSHRFGKHLRQAMMDI 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 175/620 (28%)
Cpt1aNP_113747.2 CPT_N 1..47 CDD:406797
Carn_acyltransf 171..761 CDD:395612 175/618 (28%)
Coenzyme A binding. /evidence=ECO:0000250 555..567 6/11 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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