DRSC/TRiP Functional Genomics Resources

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Protein Alignment CRAT and cpt-3

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_497498.2 Gene:cpt-3 / 190055 WormBaseID:WBGene00021703 Length:722 Species:Caenorhabditis elegans


Alignment Length:676 Identity:163/676 - (24%)
Similarity:286/676 - (42%) Gaps:114/676 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LLWNLTKNSLAQQSPNGIAKKVLPASSYSTVQKTIPLEQPNLLKYHVLPLEETLNRFMTTVEPLL 97
            ::|...|..|:..:|..:       ||...:...:||.:          ||:|:.|:..:::.::
 Worm   104 IVWGTVKKILSHVAPPQL-------SSCDRLLSNLPLPR----------LEDTVTRYTDSMKFVI 151

  Fly    98 TPEEFQRQKGITSEFLKKQGRELQLLLEETGSKEKNWLAHR---------WLKAAYLTYRDPVTV 153
            :.||.......:::||..:||.||...         ||.|.         |.|..|...|.|:.:
 Worm   152 SEEEHNNLIATSTQFLSHEGRTLQRFA---------WLLHLITDNYVTWFWEKYIYYAGRYPLPI 207

  Fly   154 FVSPGMTFPKQNFRDSRAFVDYTAR-VIYGLGEFNDMVHANKIPIVK--------------MGKN 203
            ..|                   |.: |:||..:...:....::..::              :|..
 Worm   208 ISS-------------------TCQCVLYGEDDLTQVYQVARLLYIETLANLSVDRQDYLAVGDG 253

  Fly   204 ELDNSQFGKVFGTCRIPRRGTDEIVYNPDSDYVVVIYKNHFYQLKIYSKEGKLIAAPCLAAQLEN 268
            .:....:..::...|:|....|...:||.|.:.:|::|..:|::....::|:|.:...||..:..
 Worm   254 LMSTRHYRNIYNGSRVPGAEIDNFQWNPPSRHALVVHKGTWYKVDTCDEDGRLYSVNELAKIVSE 318

  Fly   269 IVL---KETQVGVPYGILTTDSRDNWAE-AYEYLVETPGNRDALKTIQGALFTVSLDEGTILKEG 329
            :..   |.|........||.|.|..|:: ..::.:....|:..|:.|:.:.:.:|:|..   |.|
 Worm   319 LTTRQDKSTGFLCKISSLTADRRTEWSKNRRKFFLNNAHNKKLLEVIETSQYVISMDTA---KWG 380

  Fly   330 EETDE----LILSLIHGSGSKINSGNRWMDKTIQLVVNPNGNVGFTYEHSPAEGQPIAMMMDYVV 390
            .||.:    .:..::.|.|:     |||.|||:...:..||..|.|.|||||:|..    ||:|.
 Worm   381 VETSDKMSVYMKDMLAGDGT-----NRWFDKTMNYAICANGRGGATGEHSPADGAE----MDHVC 436

  Fly   391 QK-MKEDPSFGQSGSQD--------------FAPAQKIQFSSSNKSLEKSLNVAQENVDKLADAL 440
            :. :..|....:|.|::              ...|:|::| ...:.||:.:....|...|....|
 Worm   437 ENFLNLDKQILKSPSKEEQLEIAKLDEPSNYLKLAEKLEF-EVEEGLEEEVERCYEAHTKAVADL 500

  Fly   441 QMKVLKFNGFGKDFIKKQRLGPDSFVQMALQLAFYKMHSEPPAQYESAHLRIFDGGRTETIRSCS 505
            .:..:.|..|||..:||..:.||.|||||:|||:::...:....||:..:|.:...||||:|..:
 Worm   501 HVHSIIFLDFGKGRLKKCGISPDGFVQMAIQLAYFEDQGKFTQTYETGSIRFYANSRTETVRPVT 565

  Fly   506 NESLAFSRAMQDPNVTDQERAAKLREAVVSHQTYAKLALQGKGVDRHLLGLKLMA--LEHSKPIP 568
            :.|.....||.|...:.|.|...|:||...|....|..:.|.|.||||..|.::|  |.::.|..
 Worm   566 SASCKLVCAMLDETSSKQTRRQLLKEACEVHVNNCKEVMLGNGFDRHLFVLCVIAKGLGYNSPFL 630

  Fly   569 EFFKSPGFVKS-SHFRMSTSQVA--TKYDAFM---GYGPATDDGYACCYNPRDNDIILA-ISAWR 626
            :||.|..::.| |:....|:.:|  |..:..|   .:|....|||..||....|..||. |:::.
 Worm   631 DFFSSQKWLLSTSNIPNMTNSIAEDTSVNNIMLGGSFGAVAQDGYGICYRFGGNHAILVHITSYH 695

  Fly   627 HCPITDHLKFVKTLEQSFFEMKNVLE 652
            ...:||..:....|:.:|..:..:.:
 Worm   696 SSELTDSERIGNRLKSAFHRLAGLFD 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 155/629 (25%)
cpt-3NP_497498.2 Carn_acyltransf 128..716 CDD:376382 157/638 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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