DRSC/TRiP Functional Genomics Resources

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Protein Alignment CRAT and cpt-6

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_504648.1 Gene:cpt-6 / 179035 WormBaseID:WBGene00020911 Length:746 Species:Caenorhabditis elegans


Alignment Length:654 Identity:170/654 - (25%)
Similarity:294/654 - (44%) Gaps:89/654 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GIAKKVLPASSYSTVQKTIPLEQPNLLKY--HVLP------LEETLNRFMTTVEPLLTPEEFQRQ 105
            ||.:.:|..|             |.:|:.  .:||      |::|::.::.:::.:|:.:|::..
 Worm   128 GIVRHILSIS-------------PPILESCDRLLPSLPVPALKDTISEYLDSMKHILSEQEYEIV 179

  Fly   106 KGITSEFLKKQGRELQLLLEETGSKEKNWLAHRWLKAAYLTYRDPVTVFVSPG---MTFPKQNFR 167
            .....|||:.:|::||...........|::...|.|.|||..|.|:.:..|..   :...|:..|
 Worm   180 AKQAHEFLENEGKKLQRYTWIYSLFTDNYVTSFWQKYAYLHGRYPLMINSSVAHCDLLRDKEATR 244

  Fly   168 DSRAFVDYTARVIYGLGEFNDMVH--ANKIPIVKMGKNELDNSQFGKVFGTCRIPRRGTDEIVYN 230
            ..||     |||.:    ...|.|  .::.....:|...:....:..::...|.|.:..|:::.:
 Worm   245 AHRA-----ARVTW----IEVMSHLAIDRQQYKALGDGLVCTRHYKNMYAVTREPGKKIDQLILH 300

  Fly   231 PDSDYVVVIYKNHFYQLKIYSKEGKLIAAPCLAAQLENIVLK-ETQVGV--PYGILTTDSRDNW- 291
            ....::||:.:..:|::.:...:..:.....|......::.: |.:.||  ....||.|:||:| 
 Worm   301 GIQKHIVVVLRGKYYKIHVVDDKNNIYTVEQLTKIFHEMISRDEKEEGVIGKIAALTHDTRDSWH 365

  Fly   292 AEAYEYLVETPGNRDALKTIQGALFTVSLDE----GTILKEGEETDELILSLIHGSGSKINSGNR 352
            ....:|.:....|...||.|:.|:|..:|||    |...|:.|.....:.:.:.|.|:     ||
 Worm   366 RNRQKYFLGNVKNAQILKEIECAVFFFTLDENDDYGYDEKKPEVLSNFLANCLSGDGT-----NR 425

  Fly   353 WMDKTIQLVVNPNGNVGFTYEHSPAEGQPIAMMMD---YVVQKMKEDPSFGQSGSQDFAPAQKIQ 414
            |:||::..:.:.|...|.|.|||.|:|.....:|:   ||..::.:..|..:.        :|:.
 Worm   426 WVDKSLNYICSKNARCGGTTEHSIADGAEFDHIMENFVYVDLEVLKYKSIEEQ--------EKMA 482

  Fly   415 FSSSNKSLEKSLNVA---------QENVDKLA---DA-------LQMKVLKFNGFGKDFIKKQRL 460
            ....|.  :|||.:|         ||.:.::.   ||       |.:..|.|..|||..|||..:
 Worm   483 VIEEND--KKSLKLATPLNFEVPDQEMLSEITRCYDAHQIAKNDLDLYALAFRDFGKGRIKKCGV 545

  Fly   461 GPDSFVQMALQLAFYKMHSEPPAQYESAHLRIFDGGRTETIRSCSNESLAFSRAMQDPNVTDQER 525
            .||:|:|||:|||.|:...:....||.|..|.|...||||:|:.::.|..|..||.:.|.|.:.:
 Worm   546 SPDAFIQMAIQLANYRDQGKFVLTYEPASARFFANSRTETLRTVNDHSCEFVEAMLNANETKEAK 610

  Fly   526 AAKLREAVVSHQTYAKLALQGKGVDRHLLGLKLMALE---HSKPIPEFFKSPGFVKSSHFRMSTS 587
            .|.|::|..:|....|..:.|:||||||..|.:::..   .|..:..:......:.:||....|:
 Worm   611 IALLKKACETHVLRNKKCMVGQGVDRHLFVLYILSQGTGIQSPFLDNYINQKWKLSTSHVPNVTN 675

  Fly   588 QVATKYDA---FMG--YGPATDDGYACCYNPRDNDIILA-ISAWRHCPITDHLKFVKTLEQSFFE 646
            |.....|:   ::|  :|....|||..||....|..|.| |:::.....||..||.|.|.:||.|
 Worm   676 QCDEDTDSDNTWLGACFGAVAADGYGICYRFGGNHGIFANITSYHSAANTDSTKFAKLLSESFHE 740

  Fly   647 MKNV 650
            :.|:
 Worm   741 LSNL 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 164/625 (26%)
cpt-6NP_504648.1 Carn_acyltransf 148..741 CDD:376382 162/616 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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