DRSC/TRiP Functional Genomics Resources

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Protein Alignment CRAT and cpt-4

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_504348.1 Gene:cpt-4 / 178889 WormBaseID:WBGene00019644 Length:748 Species:Caenorhabditis elegans


Alignment Length:681 Identity:180/681 - (26%)
Similarity:312/681 - (45%) Gaps:64/681 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TSERILEKTEAEMKFRGNGKLLWNLTKNSLAQQSPNGIAKKVL------PASSYSTVQKTIPLEQ 71
            ||..||........|...|.|..|..|.|: :....|:.:|||      ..||...:...:||. 
 Worm    85 TSIFILRHILKYFYFSYKGYLFENPKKPSI-RTMIWGVLRKVLLTIAPPQLSSCDRLLPNLPLP- 147

  Fly    72 PNLLKYHVLPLEETLNRFMTTVEPLLTPEEFQRQKGITSEFLKKQGRELQLLLEETGSKEKNWLA 136
                     .|::|::|::.:::.|::.|::.:...::.:|:..:||.:|...........|::.
 Worm   148 ---------ALQDTVDRYVDSMKHLMSEEDYDQLLEMSRKFVSNEGRSIQRYAWFLHKFTDNYVT 203

  Fly   137 HRWLKAAYLTYRDPVTVFVSPGMTFPKQNFRDSRAFVDY-TARVIYGLGEFNDMVHANKIPIVKM 200
            ..|.:..|:..|.|:.:..|....   ..:.:|.....| .||:||.....|..:...|  .:.:
 Worm   204 SLWEQYIYMAGRYPLLINSSVAQC---TMYGESDLIQAYQVARLIYIETIANLALDRQK--YMAI 263

  Fly   201 GKNELDNSQFGKVFGTCRIPRRGTDEIVYNPDSDYVVVIYKNHFYQLKIYSKEGKLIAAPCLAAQ 265
            |:..:....:..::..||||.:..|...:|..:.:|::::...:|::.|....|:|.....||..
 Worm   264 GEGLMSTRHYRNIYNGCRIPGKQYDSFQWNKPAKHVILVHDCTWYKVDICDSNGQLYTVDQLAKI 328

  Fly   266 LENIVLKETQ-VGVPYGI--LTTDSRDNW-AEAYEYLVETPGNRDALKTIQGALFTVSLDEGTIL 326
            :..::.::.: .|....|  ||||.|..| :...::.:|...|:..|:.|:.|.|.:|:|..  |
 Worm   329 VAEVMGRDDKSKGYLRNIASLTTDRRTEWCSNRQKFFLENKHNQKLLQQIETAQFVMSVDGD--L 391

  Fly   327 KEGEETDE----LILSLIHGSGSKINSGNRWMDKTIQLVVNPNGNVGFTYEHSPAEGQPIAMMMD 387
            ..|.||.|    .:..::.||||     |||:|||:...|:.:|..|.|.||||.:|..:..:.:
 Worm   392 NWGVETTEQLSKYMKDMLAGSGS-----NRWVDKTMNYAVDASGRAGATGEHSPCDGAELDHLCE 451

  Fly   388 YVVQKMKE---DPS-----------FGQSGSQDFAPAQKIQFSSSNKSLEKSLNVAQENVDKLAD 438
            .|:...|:   .||           |.:..|  ...|||:.|...: .:|..:|...|...|.:|
 Worm   452 NVLNVDKQVLVSPSTEEQLEIIKMTFTEKNS--LRLAQKLDFQEVD-GMETEVNRCFEQHHKASD 513

  Fly   439 ALQMKVLKFNGFGKDFIKKQRLGPDSFVQMALQLAFYKMHSEPPAQYESAHLRIFDGGRTETIRS 503
            .|.|..:.|..|||..:||..:.||.|:|||:|||.|....:....||...:|.:...||||:|.
 Worm   514 DLHMHSIAFTDFGKGRVKKCGISPDGFLQMAIQLANYYDQGKFVLTYEPGSVRFYANSRTETLRP 578

  Fly   504 CSNESLAFSRAMQDPNVTDQERAAKLREAVVSHQTYAKLALQGKGVDRHLLGLKLMA--LEHSKP 566
            .::.|..|.:||.....|.:||...|::|..:|....|..:.||||||||..|.::|  |.:|.|
 Worm   579 VTDYSCKFVQAMLSDESTQKERRDLLKKACEAHVENCKEVMTGKGVDRHLFVLCVLAKGLGYSSP 643

  Fly   567 -IPEFFKSPGFVKSSHFRMSTSQV---ATKYDAFMG--YGPATDDGYACCYNPRDNDIILA-ISA 624
             :.|:......:.:|:....|:.|   .::.:..:|  :|....|||..||....|..|:. |::
 Worm   644 FLEEYANQKWLLSTSNIPNMTNSVDEDISEDNIMLGASFGAVAQDGYGICYRFAGNRAIMVHITS 708

  Fly   625 WRHCPITDHLKFVKTLEQSFFEMKNVLEKNP 655
            :...|.||..:|.:.|.::...:.::.:..|
 Worm   709 YHSSPATDSDRFGQHLREAIHTLADLFDDEP 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 161/605 (27%)
cpt-4NP_504348.1 Carn_acyltransf 150..731 CDD:376382 160/595 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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