DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRAT and Cpt1b

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_034078.2 Gene:Cpt1b / 12895 MGIID:1098297 Length:772 Species:Mus musculus


Alignment Length:621 Identity:175/621 - (28%)
Similarity:291/621 - (46%) Gaps:63/621 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 QPNLLKYHVLPLEETLNRFMTTVEPLLTPEEFQRQKGITSEFLKKQGRELQLLLEETGSKEKNWL 135
            |.:|.|..|..:..|::|::.:|.|||..|.:.|.:.:..||..|....||..|........|::
Mouse   170 QTSLPKLPVPSVPATIHRYLDSVRPLLDDEAYYRMETLAKEFQDKTAPRLQKYLVLKSWWATNYV 234

  Fly   136 AHRWLKAAYLTYRDPVTV----FVSPGMTFPKQNFRDSRAFVDYTARVIYGLGEFNDMVHANKI- 195
            :..|.:..||..|.|:.|    :....:.....|.:.:|     ....::.:..:...:...:| 
Mouse   235 SDWWEEYVYLRSRSPLMVNSNYYAMDFVLIKNTNVQAAR-----LGNAVHAMIMYRRKLDREEIK 294

  Fly   196 PIVKMGKNELDNSQFGKVFGTCRIPRRGTDEIVYNPDSDYVVVIYKNHFYQLKIYSKEGKLIAAP 260
            |::.:|...:.:.|..::|.|.|||.:.||.:.:..:|.:|.|.:|..|:::.:|  ||..:..|
Mouse   295 PVMALGMVPMCSYQMERMFNTTRIPGKETDLLQHLSESRHVAVYHKGRFFKVWLY--EGSRLLKP 357

  Fly   261 -CLAAQLENIVLKETQVGVP----YGILTTDSRDNWAEAYEYLVETPGNRDALKTIQGALFTVSL 320
             .|..|.:.| |.:.....|    ...||...|..||||.:....:..|:.:|..|:.|.|.|:|
Mouse   358 RDLEMQFQRI-LDDPSPPQPGEEKLAALTAGGRVEWAEARQTFFSSGKNKMSLDAIERAAFFVTL 421

  Fly   321 DEGTILKEGEETDELIL---SLIHGSGSKINSGNRWMDKTIQLVVNPNGNVGFTYEHSPAEGQPI 382
            ||.:.....::...|.|   :|:||     |..|||.||:..|:...||.:|...|||.|:...|
Mouse   422 DEDSHCYNPDDETSLSLYGKALLHG-----NCYNRWFDKSFTLISCKNGLLGLNTEHSWADAPII 481

  Fly   383 AMMMDYVVQKMKEDPSFGQSG------SQDFAPAQKIQF---SSSNKSLEKSLNVAQENVDKLAD 438
            ..:.::|:........:.::|      :....|.|::.:   ....:::|.|..||:    .|||
Mouse   482 GHLWEFVLGTDTFHLGYTETGHCVGEPNTTLPPPQRLPWDIPEQCREAIENSYQVAK----ALAD 542

  Fly   439 ALQMKVLKFNGFGKDFIKKQRLGPDSFVQMALQLAFYKMHSEPPAQYESAHLRIFDGGRTETIRS 503
            .:::...:|..|||..|||.|..||:|||:|||||.::...:....||::..|:|..|||||:||
Mouse   543 DVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDKGKFCLTYEASMTRMFREGRTETVRS 607

  Fly   504 CSNESLAFSRAMQDPNVTDQERAAKLREAVVSHQTYAKLALQGKGVDRHLLGLKLMA--LEHSKP 566
            |:|||.||.:||...:...|:.....|:|...||...:||:.|.|:||||..|.:::  |..|.|
Mouse   608 CTNESAAFVQAMMKGSHKKQDLQDLFRKASEKHQNMYRLAMTGAGIDRHLFCLYIVSKYLGVSSP 672

  Fly   567 -IPEFFKSPGFVKSSHFRMSTSQV----ATKYD---------AFMGYGPATDDGYACCYN-PRDN 616
             :.|....|       :.:||||:    ...:|         |..|:||..||||...|. ..:|
Mouse   673 FLAEVLSEP-------WSLSTSQIPQFQICMFDPKQYPNHLGAGGGFGPVADDGYGVSYMIAGEN 730

  Fly   617 DIILAISAWRHCPITDHLKFVKTLEQSFFEMKNVLE 652
            .:...||:......|:..:|...:.|:..::..:.:
Mouse   731 TMFFHISSKYSSSETNAQRFGNHIRQALLDIAELFK 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 174/612 (28%)
Cpt1bNP_034078.2 CPT_N 1..46 CDD:293093
Carn_acyltransf 173..761 CDD:279140 174/611 (28%)
Coenzyme A binding. /evidence=ECO:0000250 555..567 6/11 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.