DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRAT and Chat

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_034021.1 Gene:Chat / 12647 MGIID:88392 Length:645 Species:Mus musculus


Alignment Length:644 Identity:202/644 - (31%)
Similarity:325/644 - (50%) Gaps:47/644 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 IAKKVLPASSYSTVQKTIPLEQPNLLKYHVLPLEETLNRFMTTVEPLLTPEEFQRQKGITSEFLK 114
            |.:||.|.   ..||.:...|..:|.|..|.||::||..::..::.|:..|:|::.:.|...|..
Mouse     3 ILEKVPPK---MPVQASSCEEVLDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGA 64

  Fly   115 K--QGRELQLLLEETGSKEKNWLAHRWLKAAYLTYRDPVTVFVSPGMTFPKQNFRDSRAFVDYTA 177
            .  .|..||..|.|...|..||::..||...||..|..:.|..||.:.|.:|:|:|:...:.:.|
Mouse    65 PGGLGETLQEKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTNDQLRFAA 129

  Fly   178 RVIYGLGEFNDMVHANKIPIVKMGKNELDN-----SQFGKVFGTCRIPRRGTDEIVYN-----PD 232
            .:|.|:..:..::.:..|| ....|.:|..     .|:.::|.:.|:|....|.:|..     |:
Mouse   130 SLISGVLSYKALLDSQSIP-TDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIMPE 193

  Fly   233 SDYVVVIYKNHFYQLKIY-----SKEGKLIAAPCLAAQLENIV---LKETQVGVPYGILTTDSRD 289
            .::|:|...|.|:.|.:.     ..||.|.      .||..||   ..|.:...|.|:||:|.|.
Mouse   194 PEHVIVACCNQFFVLDVVINFRRLSEGDLF------TQLRKIVKMASNEDERLPPIGLLTSDGRS 252

  Fly   290 NWAEAYEYLVETPGNRDALKTIQGALFTVSLD-EGTILKEGEETD-ELILSLIHGSGSKINSGNR 352
            .||:|...|::...|||:|..|:..:..|.|| .||    |:.:| ...|.|:||.|..:|..||
Mouse   253 EWAKARTVLLKDSTNRDSLDMIERCICLVCLDGPGT----GDLSDTHRALQLLHGGGCSLNGANR 313

  Fly   353 WMDKTIQLVVNPNGNVGFTYEHSPAEGQPIAMMMDYVVQKMKE-DPSFGQSGSQDFAPA-QKIQF 415
            |.||::|.||..:|..|...||||.:|..:....:::::.|.. :....::.|....|| :::::
Mouse   314 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTGNKKLVRADSVSELPAPRRLRW 378

  Fly   416 SSSNKSLEKSLNVAQENVDKLADALQMKVLKFNGFGKDFIKKQRLGPDSFVQMALQLAFYKMHSE 480
            ..|.:: :..|..:.|.:.::...|...|.||:.:||.|||||:..||.|:|:|||||:|:::..
Mouse   379 KCSPET-QGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDGFIQVALQLAYYRLYQR 442

  Fly   481 PPAQYESAHLRIFDGGRTETIRSCSNESLAFSRAMQDPN--VTDQERAAKLREAVVSHQTYAKLA 543
            ....||||.:|.|..||.:.|||.:.|:|||.:||.|..  |...|:...|:.|:.:...|..:|
Mouse   443 LVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAVLASEKLQLLQRAIQAQTEYTVMA 507

  Fly   544 LQGKGVDRHLLGLKLMALEHSKPIPEFFKSPGFVKSSHFRMSTSQVATKYDAFMGYGPATDDGYA 608
            :.|..:|.|||.|:.:|.:..|..||.|....::.|:.|.:|||||.|..:.|..|||...:||.
Mouse   508 ITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFILSTSQVPTTMEMFCCYGPVVPNGYG 572

  Fly   609 CCYNPRDNDIILAISAWRHCPITDHLKFVKTLEQSFFEMKNV------LEKNPPETKSK 661
            .||||:...|...||::..|..|..::|.:.:..|..:|:::      .|..||..|.:
Mouse   573 ACYNPQPEAITFCISSFHGCKETSSVEFAEAVGASLVDMRDLCSSRQPAEGKPPTAKER 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 190/599 (32%)
ChatNP_034021.1 Carn_acyltransf 24..612 CDD:279140 190/599 (32%)
Coenzyme A binding. /evidence=ECO:0000250 413..425 7/11 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3717
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 1 1.000 - - FOG0001049
OrthoInspector 1 1.000 - - otm43021
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2058
SonicParanoid 1 1.000 - - X630
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.850

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