DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRAT and chatb

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001278811.1 Gene:chatb / 103171573 ZFINID:ZDB-GENE-140429-2 Length:635 Species:Danio rerio


Alignment Length:645 Identity:192/645 - (29%)
Similarity:304/645 - (47%) Gaps:60/645 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VLPASSYSTVQKTIPLEQPNLLKYHVLPLEETLNRFMTTVEPLLTPEEFQRQKGITSEFLKK--Q 116
            ||.|::.:...:.:|...|      |..|::||..::..|:.|::..:|:|......||.:.  .
Zfish     4 VLKAAAEAGSGRRVPPPLP------VPELQQTLVWYLRAVQHLVSEAQFRRTSAAVEEFRRAGGA 62

  Fly   117 GRELQLLLEETGSKEKNWLAHRWLKAAYLTYRDPVTVFVSPGMTFPKQNFRDSRAFVDYTARVIY 181
            |..||..|.|..:...||:...||:..||....|:.|..||.:..|.|.||:....:::.||:|.
Zfish    63 GETLQRRLLERRAHTHNWVYQLWLEDMYLKNTLPLPVHSSPALVLPIQAFREPGDRLEFAARLIL 127

  Fly   182 GLGEFNDMVHANKIPIVKMGKN-ELDNSQFGKVFGTCRIPRRGTDEIVYNPDSD--YVVVIYKNH 243
            |:.|....|..:.:|:...|.. .|...|:.::|...|......|.::....|.  :.:|..:|.
Zfish   128 GVCELKTAVDRDSLPLDSAGSGVPLCMDQYKRLFSCYRRAGLQQDTLISTEPSQNTHAIVACRNQ 192

  Fly   244 FYQLKIYSKEGKLIAAPCLA---AQLENIVLKETQVGVPY-----------------GILTTDSR 288
            |:.|.        ::..|..   ::|::.:|..|:....:                 |:||...|
Zfish   193 FFVLN--------LSVGCRTLSQSELQHQLLWITEHTHTHTHTHTHTHTTPEQPPALGLLTAACR 249

  Fly   289 DNWAEAYEYLVETPGNRDALKTIQGALFTVSLDEGTILKEGEETDELILSLIHGSGSKINSGNRW 353
            .:||.|.:.|:....||.:|:.::..:..|.|||...| |....|...| ::||.|...|.||||
Zfish   250 RDWATARQQLLTDEENRRSLELMERCVCVVCLDEPAGL-EPCAADRAAL-ILHGGGPDRNGGNRW 312

  Fly   354 MDKTIQLVVNPNGNVGFTYEHSPAEGQPIAMMMDYVVQKMK--------------EDPSFGQ--- 401
            .||.:|.||..:|..|...|||.|||..:...:::|:::..              .|.....   
Zfish   313 YDKPLQFVVGADGVCGVVCEHSAAEGIVLVQCVEHVLKRTSVSELEHTHLSNTHHSDTHCSDTHV 377

  Fly   402 SGSQDFAPAQKIQFSSSNKSLEKSLNVAQENVDKLADALQMKVLKFNGFGKDFIKKQRLGPDSFV 466
            ||.....|..:......:..:|:.|..|...:..|...|.|:|..|:.|||...|:||:.||.|:
Zfish   378 SGWTTGLPQPRRLLWKCSPRVEEMLAAAANQLQGLVWDLHMRVFVFSAFGKTLXKQQRISPDGFI 442

  Fly   467 QMALQLAFYKMHSEPPAQYESAHLRIFDGGRTETIRSCSNESLAFSRAMQ--DPNVTDQERAAKL 529
            |:|:|||:|:.||...:.||||.||.|..||.|.|||.:.|:|.|..||.  ..:|.|.|:..||
Zfish   443 QLAIQLAYYRTHSRAVSTYESASLRRFHLGRVEIIRSATAEALRFCTAMSGGGASVQDSEKMEKL 507

  Fly   530 REAVVSHQTYAKLALQGKGVDRHLLGLKLMALEHSKPIPEFFKSPGFVKSSHFRMSTSQVATKYD 594
            |.|..:.......|:.|.|:|.|||||:.||.:.....|:.|....:..|:||.:|||||.|:.:
Zfish   508 RAAADAQAQLTLRAVTGNGMDNHLLGLREMARQMEMQTPDIFSDETYKISNHFILSTSQVPTEME 572

  Fly   595 AFMGYGPATDDGYACCYNPRDNDIILAISAWRHCPITDHLKFVKTLEQSFFEMKNVLEKN 654
            .|..|||...|||..||||:.:.|:.::|::|....|...:..:.|:.:..:||::..|:
Zfish   573 MFCCYGPVVPDGYGVCYNPQSDHIVFSVSSFRENKETCSDRLAEELQVALLDMKDLCMKH 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 184/617 (30%)
chatbNP_001278811.1 Carn_acyltransf 27..626 CDD:279140 182/608 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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