DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRAT and LOC100333227

DIOPT Version :9

Sequence 1:NP_001287195.1 Gene:CRAT / 40787 FlyBaseID:FBgn0037440 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_017209389.1 Gene:LOC100333227 / 100333227 -ID:- Length:786 Species:Danio rerio


Alignment Length:644 Identity:185/644 - (28%)
Similarity:309/644 - (47%) Gaps:91/644 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 QPNLLKYH-------VLPLEETLNRFMTTVEPLLTPEEFQRQKGITSEFLKKQGRELQLLLEETG 128
            ||.|..|.       |..:::|:.|::.:|.||:...|::|...:..||....|..||..|:...
Zfish   161 QPLLYSYQGSLPNLPVPAVKDTVKRYLESVRPLMNDSEYERMTELAREFESSLGNRLQWYLKLKA 225

  Fly   129 SKEKNWLAHRWLKAAYLTYRDPVTV----------FVSPGMTFPKQNFRDSRAFVDYTARVIYGL 183
            ....|:::..|.:..||..|.|:.:          :|:|      ...:.:||.....|.::|..
Zfish   226 LWASNYVSDWWEEYVYLRGRGPIMINSNYYGMDFLYVTP------TPIQAARAGNTLHACLLYRR 284

  Fly   184 GEFNDMVHANKIPIVKMGKN-ELDNSQFGKVFGTCRIPRRGTDEIVYNPDSDYVVVIYKNHFYQL 247
            ....:.:..:::|    |.| .|..:|..::|.|.|||...||.:::..||:||||.::..:::|
Zfish   285 KLNREEIKPSRVP----GLNIPLCAAQCERIFNTTRIPGEETDSLMHWQDSEYVVVFHRGRYFRL 345

  Fly   248 KIYSKEGKLIAAPCLAAQLENIV-------LKETQVGVPYGILTTDSRDNWAEAYEYLVETPGNR 305
            .:|: .|:|::...:..|::.|:       ..|.::..    ||...|..||:..:....:..|:
Zfish   346 WLYN-AGRLLSPREIEQQIQRILDDPSPPASGEAKLAA----LTAGERIPWAQTRKEFFGSGVNK 405

  Fly   306 DALKTIQGALFTVSLDEGTILKEGEE----TDELILSLIHGSGSKINSGNRWMDKTIQLVVNPNG 366
            .:|..|:.|.|.|:||:......|::    .|....||:||     ...:||.||:..:|:..||
Zfish   406 RSLDCIEKAAFFVTLDDDEQGMMGDDPAGNLDRYAKSLLHG-----KCYDRWFDKSFTVVLYKNG 465

  Fly   367 NVGFTYEHSPAEGQPIAMMMDYVVQKMKEDPSFGQSG--SQDFAPA----QKIQF---SSSNKSL 422
            ..|...|||.|:...:|.:.:||:........:.:.|  ..|.||.    .::.:   :...:.:
Zfish   466 KNGLNAEHSWADAPIMAHLWEYVMTTDCFQLGYNEEGHCKGDVAPTLPPPSRLTWDIPAQCQERV 530

  Fly   423 EKSLNVAQENVDKLADALQMKVLKFNGFGKDFIKKQRLGPDSFVQMALQLAFYKMHSEPPAQYES 487
            ::||.|||    .|||.|...|.....|||..|||.::.||:|:|:|||||:|:........||:
Zfish   531 QRSLAVAQ----ALADDLDFHVFPIQEFGKGAIKKCKISPDAFIQIALQLAYYRNRGTFSLTYEA 591

  Fly   488 AHLRIFDGGRTETIRSCSNESLAFSRAMQDPNVTDQERAAKL-REAVVSHQTYAKLALQGKGVDR 551
            :..|:|..|||||:|||::||.||.||::...  .:|...:| |.|...||...::|:.|.|:||
Zfish   592 SMTRLFREGRTETVRSCTSESCAFVRALEGGE--SKEVCRRLFRTASEKHQQLYRMAMTGGGIDR 654

  Fly   552 HLLGLKLMALEHSKPIPEFFKSPGFVK---SSHFRMSTSQVATK----YDAFM----------GY 599
            ||..|.::    ||.:.|  :|| |:|   |..:|:||||...:    :| |:          |:
Zfish   655 HLFCLYIV----SKYLGE--ESP-FLKEVLSDTWRLSTSQTPLQQVELFD-FVNHPDYTTCGGGF 711

  Fly   600 GPATDDGYACCY-NPRDNDIILAISAWRHCPITDHLKFVKTLEQSFFEMKNVLEKNPPE 657
            ||..||||...| ...:|.|...||....||.||..||...::::..::..::..:..|
Zfish   712 GPVADDGYGVSYIIIGENMINFHISCKHSCPQTDAHKFGAYIKKALVDLLELMSPDKQE 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRATNP_001287195.1 Carn_acyltransf 74..648 CDD:279140 182/630 (29%)
LOC100333227XP_017209389.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.