DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42724 and Fip1

DIOPT Version :10

Sequence 1:NP_001189184.1 Gene:CG42724 / 40785 FlyBaseID:FBgn0261641 Length:1123 Species:Drosophila melanogaster
Sequence 2:NP_649476.1 Gene:Fip1 / 40569 FlyBaseID:FBgn0037255 Length:701 Species:Drosophila melanogaster


Alignment Length:927 Identity:228/927 - (24%)
Similarity:335/927 - (36%) Gaps:290/927 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ATESPPEAGLNGNGSGSGSTSQETPNYGVAILKEKPSEAHRSKPFNAFSGRPIGEHTAQQQALQQ 87
            |.::..::.|.|. |...||:.|..|.|.::..|..|.|..::   |.:....||......... 
  Fly     2 ADDTNEDSWLYGT-SNPDSTTGELGNGGDSLTAEHESAAAEAQ---ALAELVAGEKPGASAGTN- 61

  Fly    88 QQLQQQQQPQQPQQQAPSGANGVTGPPEIWVETKA---EDGRSYYYHAVTRETTWSRPDGPA--- 146
               ..:..|:.|:::.|..:.......|:..:..|   .|.||      .||....|..|..   
  Fly    62 ---STEDSPRCPKEEVPEYSEFDDPAQEMEEDEDALPNTDSRS------RRERDRERDRGRCADR 117

  Fly   147 --VKIMTQAEVEEMAKRPAQAAKTEAKAGETSVEIPPVSSHLTSQPPPHLMSQPPPNAAAPLLSQ 209
              .:.....|.:||:..||...:......:...:..               |....|.....:.|
  Fly   118 ADARSSPDPEDDEMSDGPAARRERNGSGSDDDEDDD---------------SDDDINVVIGDIKQ 167

  Fly   210 PPP--NVRQQPPPMFQPPGM---QAPPGFGQPPFCMPPPTYGFPGGPAPAGAPWGVGIPPWQQQQ 269
            .|.  |::|:|..:....|.   :|.|......|.:.    .|.|    ||...||.:..:....
  Fly   168 APSTYNIKQRPNLLAGGTGAAGDKAKPAGQAGKFSIE----DFEG----AGTINGVAVHEFSIDS 224

  Fly   270 HMQDKPAKSLIIKPGVIDPAVIARAAEWSEHRAPDGRPYYFHAGRGESVWEKPQALRDMEAARMA 334
             :::||.:    |||          |:.::         ||:.|..|..|   :|..:.:.....
  Fly   225 -LEEKPWR----KPG----------ADITD---------YFNYGFNEETW---RAYCERQKRFRV 262

  Fly   335 AHSGVAPAVAT------APSGL---------PP--HLLPNPM-------MHMPPGSGPPGFDPHA 375
            |.|||..|..|      ||.|:         ||  |.:.:.:       |.|||...||....| 
  Fly   263 AESGVGLASLTQNVNQNAPIGILTDGGMGMGPPGMHSIQSMVGMGGESGMQMPPPGMPPPMMQH- 326

  Fly   376 AFAAAAAAMKANSENTKAAQAAALEKEAKKAAEEKRKKEEEQKKAAASAKQTDKS--RPVT-STP 437
               .:.:.|.......:.......::...:   |:..||...:...|..::..:.  .|:. :.|
  Fly   327 ---QSRSGMGLMQRPPRPISTTGGDRGGDR---ERAVKENAIQVMTAECREYSRGGLGPMAPNFP 385

  Fly   438 IAGTPWCVVWTGDSRVFFYNPS--------TRTSVWDRPEDLLNREDVDKAVNE---------RP 485
            :.|        .....||:.|.        |:.|.|:..    |...|...:.|         :|
  Fly   386 LPG--------ASEEPFFHEPEPFDYGYEPTQESQWNND----NAGWVPSGIKELTPGHAHMQQP 438

  Fly   486 EQLKTPQEKSAEAEQKSGEEANQEQAKSQVQAQQLDQVQRVDADDDDDDEVIKIRTESESSVEEV 550
            .....|...|....|..|...|.                                          
  Fly   439 PPGMPPPGMSVPPPQMGGPPPNL------------------------------------------ 461

  Fly   551 PTKRVRMISKSKRAEDAALEAEQRAAKERALVPLEMRVTQFKEMLREKDVSAFSTWEKELHKIVF 615
                                        |.::|..||:.....|                    .
  Fly   462 ----------------------------RGIMPPNMRMPPNMNM--------------------G 478

  Fly   616 DPRYLLLTSKERKQVFEKYVKDRAEEERKEKRNKMRQKREDFRSLMEEARLHGKSSFSEFSQRNA 680
            .|..:::......|                    ||.               |.:.    .||.|
  Fly   479 PPPGMMMGGNAPPQ--------------------MRM---------------GMAP----PQRLA 504

  Fly   681 KDERYRAIEKVRERESLFNEYIVEVRRREKEDKLLKKEQIRKDFLDMLRERHDIERHTRWYDIKK 745
            ..:| .|.:..|||           |||||| |||||:|:|||||||||||||||||||||||||
  Fly   505 MGDR-GAYDDDRER-----------RRREKE-KLLKKDQLRKDFLDMLRERHDIERHTRWYDIKK 556

  Fly   746 KFESDPRYRMVDSMYREEYFEDYLHIMKEEKRKEREMREQRERERHRELKSDR-KEKDKEKDKGR 809
            |||:|||||.:||.|||||||||||::||||||||:::| |||.|.:|...|: |:|||||||.:
  Fly   557 KFEADPRYRALDSSYREEYFEDYLHLLKEEKRKERDLKE-RERHRDKERSRDKDKDKDKEKDKDK 620

  Fly   810 -KDRGRSRSKDKDREHKSSKEKDKDKEEKSKSEKSKKRDTTPEEGEHREESEREERAGSDDSEVA 873
             ||:.:.:.||||::    |||:||| |.|:.|:|:.|:.:........|.:|.||:....|...
  Fly   621 DKDKEKDKEKDKDKD----KEKEKDK-ESSRRERSRSREKSSRRKSKSREKDRSERSSKSSSSNT 680

  Fly   874 RQRENEAEQKQKEREKK 890
            ....:.:|:|:..|:.|
  Fly   681 GGSSSRSEKKKSHRKDK 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42724NP_001189184.1 WW 112..144 CDD:197736 8/34 (24%)
PHA03247 <159..369 CDD:223021 47/238 (20%)
Extensin_2 180..243 CDD:252669 11/67 (16%)
WW 295..322 CDD:459800 6/26 (23%)
PRP40 443..>753 CDD:227435 75/326 (23%)
COG4913 <865..1105 CDD:443941 5/26 (19%)
FF 930..977 CDD:426471
FF 983..1036 CDD:128718
Fip1NP_649476.1 Fip1 219..261 CDD:461573 12/68 (18%)
FF 530..579 CDD:426471 43/48 (90%)
Blue background indicates that the domain is not in the aligned region.

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