DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42724 and Fip1

DIOPT Version :9

Sequence 1:NP_001189184.1 Gene:CG42724 / 40785 FlyBaseID:FBgn0261641 Length:1123 Species:Drosophila melanogaster
Sequence 2:NP_649476.1 Gene:Fip1 / 40569 FlyBaseID:FBgn0037255 Length:701 Species:Drosophila melanogaster


Alignment Length:927 Identity:228/927 - (24%)
Similarity:335/927 - (36%) Gaps:290/927 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ATESPPEAGLNGNGSGSGSTSQETPNYGVAILKEKPSEAHRSKPFNAFSGRPIGEHTAQQQALQQ 87
            |.::..::.|.|. |...||:.|..|.|.::..|..|.|..::   |.:....||......... 
  Fly     2 ADDTNEDSWLYGT-SNPDSTTGELGNGGDSLTAEHESAAAEAQ---ALAELVAGEKPGASAGTN- 61

  Fly    88 QQLQQQQQPQQPQQQAPSGANGVTGPPEIWVETKA---EDGRSYYYHAVTRETTWSRPDGPA--- 146
               ..:..|:.|:::.|..:.......|:..:..|   .|.||      .||....|..|..   
  Fly    62 ---STEDSPRCPKEEVPEYSEFDDPAQEMEEDEDALPNTDSRS------RRERDRERDRGRCADR 117

  Fly   147 --VKIMTQAEVEEMAKRPAQAAKTEAKAGETSVEIPPVSSHLTSQPPPHLMSQPPPNAAAPLLSQ 209
              .:.....|.:||:..||...:......:...:..               |....|.....:.|
  Fly   118 ADARSSPDPEDDEMSDGPAARRERNGSGSDDDEDDD---------------SDDDINVVIGDIKQ 167

  Fly   210 PPP--NVRQQPPPMFQPPGM---QAPPGFGQPPFCMPPPTYGFPGGPAPAGAPWGVGIPPWQQQQ 269
            .|.  |::|:|..:....|.   :|.|......|.:.    .|.|    ||...||.:..:....
  Fly   168 APSTYNIKQRPNLLAGGTGAAGDKAKPAGQAGKFSIE----DFEG----AGTINGVAVHEFSIDS 224

  Fly   270 HMQDKPAKSLIIKPGVIDPAVIARAAEWSEHRAPDGRPYYFHAGRGESVWEKPQALRDMEAARMA 334
             :::||.:    |||          |:.::         ||:.|..|..|   :|..:.:.....
  Fly   225 -LEEKPWR----KPG----------ADITD---------YFNYGFNEETW---RAYCERQKRFRV 262

  Fly   335 AHSGVAPAVAT------APSGL---------PP--HLLPNPM-------MHMPPGSGPPGFDPHA 375
            |.|||..|..|      ||.|:         ||  |.:.:.:       |.|||...||....| 
  Fly   263 AESGVGLASLTQNVNQNAPIGILTDGGMGMGPPGMHSIQSMVGMGGESGMQMPPPGMPPPMMQH- 326

  Fly   376 AFAAAAAAMKANSENTKAAQAAALEKEAKKAAEEKRKKEEEQKKAAASAKQTDKS--RPVT-STP 437
               .:.:.|.......:.......::...:   |:..||...:...|..::..:.  .|:. :.|
  Fly   327 ---QSRSGMGLMQRPPRPISTTGGDRGGDR---ERAVKENAIQVMTAECREYSRGGLGPMAPNFP 385

  Fly   438 IAGTPWCVVWTGDSRVFFYNPS--------TRTSVWDRPEDLLNREDVDKAVNE---------RP 485
            :.|        .....||:.|.        |:.|.|:..    |...|...:.|         :|
  Fly   386 LPG--------ASEEPFFHEPEPFDYGYEPTQESQWNND----NAGWVPSGIKELTPGHAHMQQP 438

  Fly   486 EQLKTPQEKSAEAEQKSGEEANQEQAKSQVQAQQLDQVQRVDADDDDDDEVIKIRTESESSVEEV 550
            .....|...|....|..|...|.                                          
  Fly   439 PPGMPPPGMSVPPPQMGGPPPNL------------------------------------------ 461

  Fly   551 PTKRVRMISKSKRAEDAALEAEQRAAKERALVPLEMRVTQFKEMLREKDVSAFSTWEKELHKIVF 615
                                        |.::|..||:.....|                    .
  Fly   462 ----------------------------RGIMPPNMRMPPNMNM--------------------G 478

  Fly   616 DPRYLLLTSKERKQVFEKYVKDRAEEERKEKRNKMRQKREDFRSLMEEARLHGKSSFSEFSQRNA 680
            .|..:::......|                    ||.               |.:.    .||.|
  Fly   479 PPPGMMMGGNAPPQ--------------------MRM---------------GMAP----PQRLA 504

  Fly   681 KDERYRAIEKVRERESLFNEYIVEVRRREKEDKLLKKEQIRKDFLDMLRERHDIERHTRWYDIKK 745
            ..:| .|.:..|||           |||||| |||||:|:|||||||||||||||||||||||||
  Fly   505 MGDR-GAYDDDRER-----------RRREKE-KLLKKDQLRKDFLDMLRERHDIERHTRWYDIKK 556

  Fly   746 KFESDPRYRMVDSMYREEYFEDYLHIMKEEKRKEREMREQRERERHRELKSDR-KEKDKEKDKGR 809
            |||:|||||.:||.|||||||||||::||||||||:::| |||.|.:|...|: |:|||||||.:
  Fly   557 KFEADPRYRALDSSYREEYFEDYLHLLKEEKRKERDLKE-RERHRDKERSRDKDKDKDKEKDKDK 620

  Fly   810 -KDRGRSRSKDKDREHKSSKEKDKDKEEKSKSEKSKKRDTTPEEGEHREESEREERAGSDDSEVA 873
             ||:.:.:.||||::    |||:||| |.|:.|:|:.|:.:........|.:|.||:....|...
  Fly   621 DKDKEKDKEKDKDKD----KEKEKDK-ESSRRERSRSREKSSRRKSKSREKDRSERSSKSSSSNT 680

  Fly   874 RQRENEAEQKQKEREKK 890
            ....:.:|:|:..|:.|
  Fly   681 GGSSSRSEKKKSHRKDK 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42724NP_001189184.1 WW 112..144 CDD:197736 8/34 (24%)
Extensin_2 180..243 CDD:252669 11/67 (16%)
WW 295..322 CDD:278809 6/26 (23%)
WW 441..468 CDD:278809 6/34 (18%)
FF 590..634 CDD:280090 3/43 (7%)
FF 652..701 CDD:280090 9/48 (19%)
FF 719..768 CDD:280090 43/48 (90%)
FAT-like_CAS_C 871..>935 CDD:300863 4/20 (20%)
FF 930..977 CDD:280090
FF 983..1036 CDD:128718
FF 1041..1096 CDD:280090
Fip1NP_649476.1 Fip1 219..261 CDD:282968 12/68 (18%)
FF 530..579 CDD:280090 43/48 (90%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I12176
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1388955at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2836
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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