DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42724 and dre4

DIOPT Version :9

Sequence 1:NP_001189184.1 Gene:CG42724 / 40785 FlyBaseID:FBgn0261641 Length:1123 Species:Drosophila melanogaster
Sequence 2:NP_592930.1 Gene:dre4 / 2542176 PomBaseID:SPAC13C5.02 Length:411 Species:Schizosaccharomyces pombe


Alignment Length:503 Identity:108/503 - (21%)
Similarity:193/503 - (38%) Gaps:145/503 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 WSEHRAPDGRPYYFHAGRGESVWEKPQALRDMEAARMAAHSGVAPAVATAPSGLPPHLLPNPMMH 361
            |:||:||.|.|||::|...:|.:::|..:.                                   
pombe     9 WTEHKAPSGIPYYWNAELKKSTYQRPSFIE----------------------------------- 38

  Fly   362 MPPGSGPPGFDPHAAFAAAAAAMKANSENTKAAQAAALEKEAKKA-----AEEKRKKEEEQKKAA 421
                                   |.:|.:..|:||:.....::|.     ||| ||...:.:|..
pombe    39 -----------------------KNHSSSVTASQASLAFNTSEKLFVNENAEE-RKNSRDLRKQL 79

  Fly   422 ASAKQTDKSRPVTSTPIAGTPWCVVWTGDSRVFFYNPSTRTSVWDRP------------------ 468
            ....:..|..|...:      |.||:|..:|.||:|..:..|.|:.|                  
pombe    80 PDRPKFKKRIPNNDS------WVVVFTKKNRYFFHNLKSHESYWEPPLEISKDLKILRLPIRKQI 138

  Fly   469 -EDLLNREDVDKAVNERPEQLKTPQEKSAEAEQKSG-EEANQEQAKSQVQAQQLDQVQRVDADDD 531
             :|....::||...... |::...:....|.|:.|| ||:::|..        |...:..:..|:
pombe   139 SKDSSQSQNVDSGKTNH-EEIHESRHLQTEIEEPSGLEESSEESV--------LYSEEFYEKSDE 194

  Fly   532 DDDEVIKIRTESESSVEEVPTKRVRMISKSKRAEDAALEAEQRAAKERALVPLEMRVTQFKEMLR 596
            ::||      |...|.||:......::.:.::.:|..:..:.:............||  |.|:|:
pombe   195 EEDE------EKSHSAEELEFGEEDIMYQLQQLDDETVSYDIQEQATNLSTDDARRV--FTELLK 251

  Fly   597 EKDVSAFSTWEKELHKIVFDPRYLLLTSKE-RKQVFEKYVKDRAEEERKEKRNKMRQKREDFRSL 660
            :|::.|:..||....|::.|.|:.:|.|.| ||:|||:|.|.....::..:|   :....||.:|
pombe   252 DKNIGAYQPWELVYPKLLDDDRFYVLDSGERRKEVFEEYCKSVVSTKKITRR---KNTLSDFWTL 313

  Fly   661 MEEARLHGKSSFSEFSQRNAKDERYRAIE----KVRERESLFNEYIVEVRRREKEDKLLKKEQIR 721
                 ||...|...:.|...|..:...::    ..|:.|.||.|:.: :|::..:||||..:::.
pombe   314 -----LHSLPSTLLWPQFKRKYRKSSTLQIPGYSERDFEKLFREFQI-LRKQPMQDKLLNFKKLC 372

  Fly   722 KDFLDMLRERHDIERHTRWYDIKKKFE------SDPRYRMVDSMYREE 763
            |               ::..|.|...|      :|.||.:   :.|||
pombe   373 K---------------SKTVDPKNPDEFTESILNDTRYAV---LTREE 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42724NP_001189184.1 WW 112..144 CDD:197736
Extensin_2 180..243 CDD:252669
WW 295..322 CDD:278809 11/24 (46%)
WW 441..468 CDD:278809 10/26 (38%)
FF 590..634 CDD:280090 18/44 (41%)
FF 652..701 CDD:280090 12/52 (23%)
FF 719..768 CDD:280090 10/51 (20%)
FAT-like_CAS_C 871..>935 CDD:300863
FF 930..977 CDD:280090
FF 983..1036 CDD:128718
FF 1041..1096 CDD:280090
dre4NP_592930.1 WW 4..34 CDD:197736 11/24 (46%)
WW 90..120 CDD:197736 11/35 (31%)
FF 241..290 CDD:280090 20/50 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0155
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002297
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103069
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.710

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