Sequence 1: | NP_649647.1 | Gene: | Hr83 / 40783 | FlyBaseID: | FBgn0037436 | Length: | 278 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038947050.1 | Gene: | Rxrg / 83574 | RGDID: | 620046 | Length: | 464 | Species: | Rattus norvegicus |
Alignment Length: | 316 | Identity: | 91/316 - (28%) |
---|---|---|---|
Similarity: | 136/316 - (43%) | Gaps: | 57/316 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGNCVVDKARRNWCPSCRFQRCLAV 71
Fly 72 GMNAAAVQEERGPRNQQVA-----LYRTGRRQAP-----PSQAAPSP---------------TPH 111
Fly 112 SQALHFQILAQILVTCLRQAKANEQFALLDRCQQDAIFQVVWSEIFVLRASHWSLDI-------- 168
Fly 169 -------SAMIDGCG----DEQLKRLICEAHQLRADVLELNFMESLILCR---KELAINAEYAVI 219
Fly 220 LGSHSKAALISLARYTLQQ--SNYLRFGQLLLGLRQLCLRRFDCALSCMFRSVVRD 273 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hr83 | NP_649647.1 | NR_DBD_PNR_like_2 | 7..88 | CDD:143515 | 43/80 (54%) |
Rxrg | XP_038947050.1 | Nuc_recep-AF1 | 25..133 | CDD:403126 | |
NR_DBD_RXR | 137..213 | CDD:143514 | 40/74 (54%) | ||
NR_LBD_RXR_like | 233..442 | CDD:132741 | 44/214 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166338093 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |