DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Hr83 and Rxrg

DIOPT Version :9

Sequence 1:	NP_649647.1	Gene:	Hr83 / 40783	FlyBaseID:	FBgn0037436	Length:	278	Species:	Drosophila melanogaster
Sequence 2:	XP_038947050.1	Gene:	Rxrg / 83574	RGDID:	620046	Length:	464	Species:	Rattus norvegicus

Alignment Length:	316	Identity:	91/316 - (28%)
Similarity:	136/316 - (43%)	Gaps:	57/316 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGNCVVDKARRNWCPSCRFQRCLAV 71
            ||:|||:||||||||..|:||..||||::|:...|.| ....:|::||.:||.|..||:|:||.:
  Rat   139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTC-RDNKDCLIDKRQRNRCQYCRYQKCLVM 202

  Fly    72 GMNAAAVQEERGPRNQQVA-----LYRTGRRQAP-----PSQAAPSP---------------TPH 111
            ||...|||||| .|:::.|     ...||....|     .::.|..|               .|.
  Rat   203 GMKREAVQEER-QRSRERAESEAECASTGHEDMPVERILEAELAVEPKTESYGDMSVESSTNDPV 266

  Fly   112 SQALHFQILAQILVTCLRQAKANEQFALLDRCQQDAIFQVVWSEIFVLRASHWSLDI-------- 168
            :...|  ...:.|.|.:..||....|:.|....|..:.:..|:|:.:...||.|:.:
  Rat   267 TNICH--AADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLAT 329

  Fly   169 -------SAMIDGCG----DEQLKRLICEAHQLRADVLELNFMESLILCR---KELAINAEYAVI 219
                   ||...|.|    ...|..|:.:...:|.|..||..:.:::|..   |.|:..:|...:
  Rat   330 GLHVHRSSAHSAGVGSIFDSRVLTELVSKMKDMRMDKSELGCLRAIVLFNPDAKGLSNPSEVETL 394

  Fly   220 LGSHSKAALISLARYTLQQ--SNYLRFGQLLLGLRQLCLRRFDCALSCMFRSVVRD 273
                .:....:|..||.|:  ....||.:|||.|..|......|.....|..::.|
  Rat   395 ----REKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD 446

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hr83	NP_649647.1	NR_DBD_PNR_like_2	7..88	CDD:143515	43/80 (54%)
Rxrg	XP_038947050.1	Nuc_recep-AF1	25..133	CDD:403126
		NR_DBD_RXR	137..213	CDD:143514	40/74 (54%)
		NR_LBD_RXR_like	233..442	CDD:132741	44/214 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166338093
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.840