Protein Alignment Hr83 and rxraa

DIOPT Version :9

• Sequence 1: NP_649647.1
• Gene: Hr83 / 40783
• FlyBaseID: FBgn0037436
• Length: 278
• Species: Drosophila melanogaster
• Sequence 2: XP_005161240.1
• Gene: rxraa / 555578
• ZFINID: ZDB-GENE-070314-2
• Length: 500
• Species: Danio rerio
• Alignment Length: 330
• Identity: 92/330 - (27%)
• Similarity: 135/330 - (40%)
• Gaps: 78/330 - (23%)

  Fly     7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGNCVVDKARRNWCPSCRFQRCLAV 71
            ||:|||:||||||||..|:||..||||:||:..:|.| ....:||:||.:||.|..||:|:|||:
Zfish   168 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTC-RDNKDCVIDKRQRNRCQYCRYQKCLAM 231

  Fly    72 GMNA-----AAVQEERGPRNQQVALYRTGRRQAPPSQA--------------------------- 104
            ||..     .||||||     |.|..|:.......|.|
Zfish   232 GMKREVLLHTAVQEER-----QRAKERSENEVESTSSANEDMPVEKILEAELAVEPKTETYIETN 291

  Fly   105 --APSPTPHSQALHF-QILAQILVTCLRQAKANEQFALLDRCQQDAIFQVVWSEIFVLRASHWSL 166
              .||.:|:....:. |...:.|.|.:..||....|:.|....|..:.:..|:|:.:...||.|:
Zfish   292 VPMPSNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSI 356

  Fly   167 DI---------------SAMIDGCG---DEQLKRLICEAHQLRADVLELNFMESLILCRKEL--- 210
            .:               ||...|.|   |..|..|:.:...::.|..||..:.:::|...:.
Zfish   357 AVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL 421

  Fly   211 -------AINAEYAVILGSHSKAALISLARYTLQQSNYLRFGQLLLGLRQLCLRRFDCALSCMFR 268
                   |:..:....|.::.|      .:|..|..   ||.:|||.|..|......|.....|.
Zfish   422 SNPGEVEALREKVYASLEAYCK------HKYPEQPG---RFAKLLLRLPALRSIGLKCLEHLFFF 477

  Fly   269 SVVRD 273
            .::.|
Zfish   478 KLIGD 482

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr83	NP_649647.1	NR_DBD_PNR_like_2	7..88	CDD:143515	45/85 (53%)
rxraa	XP_005161240.1	Nuc_recep-AF1	63..159	CDD:288658
		NR_DBD_RXR	166..247	CDD:143514	43/79 (54%)
		NR_LBD_RXR_like	267..478	CDD:132741	41/219 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170577500
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.840